Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL353597.2-202ENST00000434901 373 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC114755.5-201ENST00000447760 831 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 NANOGP10-201ENST00000453325 895 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 OR9M1P-201ENST00000459641 921 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 NDUFA5P9-201ENST00000472609 340 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RN7SKP5-201ENST00000517045 272 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AL121576.1-201ENST00000556055 276 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 MIR4700-201ENST00000578311 74 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AL606490.9-201ENST00000603331 271 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 CASC19-284ENST00000642142 1868 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AL451142.2-201ENST00000429076 2090 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RNU6-1279P-201ENST00000383917 103 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 SOD2P1-201ENST00000396543 562 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL391417.1-201ENST00000404100 426 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RPL5P19-201ENST00000404228 893 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 ZNF602P-201ENST00000405929 924 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RWDD4P2-201ENST00000426392 563 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL158073.1-201ENST00000426848 1104 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC005229.2-201ENST00000456995 399 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RWDD4P1-201ENST00000488019 565 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RN7SL323P-201ENST00000494712 295 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC108064.1-201ENST00000513791 460 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RNA5SP164-201ENST00000516533 110 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 SCARNA14-201ENST00000516903 136 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC008489.1-201ENST00000524271 483 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC008011.1-201ENST00000545989 227 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC006960.3-201ENST00000561845 705 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 KLKP1-201ENST00000595979 403 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AF230666.2-201ENST00000602328 725 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL163642.2-201ENST00000604722 1019 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AL139041.1-201ENST00000605480 610 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC006946.3-201ENST00000609791 756 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC026368.1-201ENST00000614934 690 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC006338.2-201ENST00000616864 791 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AP006248.2-201ENST00000623309 592 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 AC020978.9-201ENST00000624380 1141 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 OR11H5P-202ENST00000641612 1325 ntBASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRAV27A0A087WT01 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 AC093311.1-201ENST00000506586 2021 ntBASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 SNORA62-201ENST00000365493 153 ntBASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAV27A0A087WT01 TCEA1P2-201ENST00000420496 906 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms