Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA6Q9Y5G7 MTND5P28-201ENST00000438005 1594 ntBASIC5.29□□□□□ -1.56
PCDHGA6Q9Y5G7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA6Q9Y5G7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGA6Q9Y5G7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 MAPK10-328ENST00000641553 4009 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC083899.1-201ENST00000454465 3819 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 Y_RNA.51-201ENST00000362725 102 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 MIR649-201ENST00000384843 97 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 MIR130A-201ENST00000385274 89 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 MT-TH-201ENST00000387441 69 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPS3AP9-201ENST00000417027 792 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPL12P34-201ENST00000424532 479 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC012519.1-201ENST00000424588 610 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC234779.1-201ENST00000425910 285 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AL139148.1-201ENST00000427122 680 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPS27P18-201ENST00000431701 247 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 APOOP2-201ENST00000461561 539 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RN7SL329P-201ENST00000467740 299 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC079841.1-201ENST00000481228 950 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RPS17P5-201ENST00000498293 408 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC114981.1-201ENST00000503897 678 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 SNX5P1-201ENST00000505757 1041 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 HSPE1P23-201ENST00000509838 286 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 MTCYBP37-201ENST00000510642 1133 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC026412.2-201ENST00000512270 1075 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 HIGD1AP10-201ENST00000527837 282 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AP000790.1-201ENST00000528891 737 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC137627.1-201ENST00000545761 289 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC104785.1-201ENST00000603220 588 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC093765.1-201ENST00000603758 881 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AL451086.1-201ENST00000605596 223 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC243773.3-201ENST00000613270 256 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AL133243.1-201ENST00000614487 366 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AC068722.2-201ENST00000618734 544 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 AC104964.3-201ENST00000606115 2860 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 AC011978.2-201ENST00000569835 2054 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RPL21P132-201ENST00000331267 462 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 SNRPEP3-201ENST00000338402 276 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RNU6-462P-201ENST00000362659 105 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 Y_RNA.302-201ENST00000364997 102 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RNA5SP88-201ENST00000365560 109 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RNU1-149P-201ENST00000390870 161 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RPL23AP29-201ENST00000397284 453 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 AL450338.1-201ENST00000407987 512 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.27□□□□□ -1.57
PCDHGA6Q9Y5G7 AL139128.1-201ENST00000413921 941 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms