Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ATP5F1P6-201ENST00000402768 767 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 OR2X1P-201ENST00000421144 687 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AL732292.1-201ENST00000426692 226 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AL512661.1-201ENST00000434586 1253 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC005008.1-201ENST00000456151 612 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC078857.1-201ENST00000469870 667 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC023050.1-201ENST00000498198 304 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 HPRT1P1-201ENST00000509498 657 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC021146.3-201ENST00000511911 260 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC015795.1-201ENST00000513669 327 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 UBTFL9-201ENST00000534504 1148 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC093510.2-201ENST00000562820 896 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MTND4LP25-201ENST00000570218 163 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC092574.1-201ENST00000609771 420 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MIR6798-201ENST00000612887 67 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AL121873.1-201ENST00000616013 524 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MIR6810-201ENST00000622701 70 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC087190.4-201ENST00000574616 8334 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC009951.1-201ENST00000623674 2614 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AL356489.2-201ENST00000566968 3528 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 OR5P1P-201ENST00000299512 925 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 MIR16-2-201ENST00000362117 81 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 RNU1-87P-201ENST00000363727 170 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 RNU6-796P-201ENST00000391086 107 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 HDGFP1-201ENST00000405943 252 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AL160275.2-201ENST00000412010 394 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 HMGB3P31-201ENST00000413333 595 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC073310.1-201ENST00000423226 1033 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 C4BPAP2-201ENST00000428434 478 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 ETF1P3-201ENST00000430422 1160 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AL049829.1-201ENST00000465411 156 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 RPL23AP71-201ENST00000470966 469 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 NPM1P6-201ENST00000521088 871 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC008562.1-201ENST00000521763 330 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 OR4A2P-201ENST00000527276 913 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 OR5BC1P-201ENST00000529327 739 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC027104.1-201ENST00000563702 681 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC098483.2-201ENST00000603158 454 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC091979.2-201ENST00000607514 214 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC084824.5-201ENST00000612009 413 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AL138721.1-201ENST00000616756 179 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AL163051.2-201ENST00000618976 735 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC016717.3-201ENST00000624730 554 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AC007390.2-201ENST00000606229 3803 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 Z73965.1-201ENST00000623412 2297 ntBASIC4.14□□□□□ -1.75
ATG4BQ9Y4P1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.13□□□□□ -1.75
ATG4BQ9Y4P1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.13□□□□□ -1.75
ATG4BQ9Y4P1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4BQ9Y4P1 MFSD8-242ENST00000641690 4199 ntBASIC4.13□□□□□ -1.75
ATG4BQ9Y4P1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms