Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 Y_RNA.51-201ENST00000362725 102 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 Y_RNA.77-201ENST00000362962 107 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL035419.1-201ENST00000397037 564 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 RPS3AP26-201ENST00000398259 784 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL078599.1-201ENST00000402075 293 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 RN7SKP114-201ENST00000410327 279 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC016397.1-201ENST00000412463 242 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 FAR2P2-201ENST00000413041 594 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC006960.1-201ENST00000419980 153 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 FAR2P4-202ENST00000425399 584 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL590762.4-201ENST00000425885 253 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 OR5AW1P-201ENST00000426334 1006 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 USP9YP14-201ENST00000430663 563 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 YWHAEP5-201ENST00000431545 765 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MTCO1P52-201ENST00000433928 531 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 CYCSP11-201ENST00000436426 315 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC009961.3-201ENST00000449832 765 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 RN7SL808P-201ENST00000496066 299 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 PGBD4P4-201ENST00000509673 613 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MTCO3P7-201ENST00000510008 774 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 GSTP1P1-201ENST00000548078 319 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MIR4646-201ENST00000580775 63 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC022069.1-201ENST00000582910 658 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL590229.1-201ENST00000603497 542 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC106791.2-201ENST00000604680 391 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL592148.2-201ENST00000612210 372 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC008121.2-201ENST00000614647 523 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC011472.4-201ENST00000615848 491 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MFSD8-245ENST00000641743 948 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AL121950.1-201ENST00000624993 2077 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 AC090971.4-201ENST00000560291 1800 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 NSRP1P1-201ENST00000444067 1693 ntBASIC5.18□□□□□ -1.58
DKK3Q9UBP4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DKK3Q9UBP4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 UBBP2-201ENST00000376781 231 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 RNU6-452P-201ENST00000384406 107 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 RNU6-185P-201ENST00000384421 107 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 MIR23A-201ENST00000385245 73 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AL359643.1-201ENST00000404109 423 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AL355379.1-201ENST00000405542 640 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC093162.1-201ENST00000419682 124 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC019178.2-201ENST00000423595 505 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AL593851.1-201ENST00000426171 157 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AL158073.1-201ENST00000426848 1104 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 RPL12P46-201ENST00000436610 195 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 MUPP-201ENST00000438111 566 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 RPS29P22-201ENST00000472363 168 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 BZW1P2-201ENST00000473537 826 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 RPL23AP37-201ENST00000479658 549 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 LINC00888-204ENST00000487386 421 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC004980.4-201ENST00000513375 203 ntBASIC5.17□□□□□ -1.58
DKK3Q9UBP4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms