Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC091516.1-201ENST00000549191 703 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC087888.1-201ENST00000550884 1254 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AL023583.1-201ENST00000607518 1143 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC090229.1-201ENST00000590983 1609 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RPL7AP73-201ENST00000413490 353 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AL356095.1-201ENST00000417217 199 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MTND2P11-201ENST00000423638 648 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MTCO3P21-201ENST00000430791 643 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RNU6-319P-201ENST00000516025 108 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RNU6-347P-201ENST00000516658 105 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC087369.1-201ENST00000520775 996 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC007424.1-203ENST00000554613 687 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC012213.4-201ENST00000606457 354 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 AC090506.2-201ENST00000624521 419 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MIR492-201ENST00000638676 116 ntBASIC3.97□□□□□ -1.77
TREX1Q9NSU2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TREX1Q9NSU2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TREX1Q9NSU2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TREX1Q9NSU2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 CASC19-261ENST00000641853 1638 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 MIR92A2-201ENST00000385299 75 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 MTCYBP7-201ENST00000419540 1134 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC048351.1-201ENST00000420064 602 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 HIGD1AP4-201ENST00000430194 280 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AL356535.1-201ENST00000440335 398 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 YWHAQP9-201ENST00000445891 512 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 RPS17P13-201ENST00000448974 407 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC010683.1-201ENST00000473673 378 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 SYT14P1-201ENST00000481459 721 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC069499.1-201ENST00000489433 509 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC010627.1-201ENST00000503819 1294 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC108471.1-201ENST00000513977 287 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC138701.1-201ENST00000524329 714 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC007620.3-201ENST00000608131 497 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 MIR6716-201ENST00000613413 80 ntBASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 RMST_9.1-201ENST00000619945 193 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms