Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 RPL29P14-201ENST00000495837 428 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 UBE2CP3-201ENST00000502715 450 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 MTATP6P22-201ENST00000507369 598 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC005798.1-201ENST00000513715 387 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC010342.1-201ENST00000514047 877 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR2114-201ENST00000516645 80 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 RNU7-143P-201ENST00000516781 65 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AP004242.1-201ENST00000533701 349 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AC015911.5-201ENST00000587076 451 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 MTCO2P22-201ENST00000603246 681 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AL451044.1-201ENST00000604867 238 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR486-1-201ENST00000612171 68 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AL445363.3-201ENST00000623080 671 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 AF127577.6-201ENST00000623352 2191 ntBASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC119744.1-201ENST00000454746 1715 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RNA5SP322-201ENST00000363617 119 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL23AP59-201ENST00000399415 461 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 BX510359.3-201ENST00000422168 306 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AF228730.2-201ENST00000438784 848 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 ACTR3P2-201ENST00000439585 1257 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL157884.3-201ENST00000448273 1184 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 PPIAP3-201ENST00000450588 505 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RPS20P32-201ENST00000456044 356 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL35P6-201ENST00000490024 372 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 HPRT1P2-201ENST00000505250 544 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC113398.2-201ENST00000507630 558 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 IGLVIV-65-201ENST00000517313 360 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 IGKV2-23-201ENST00000518729 323 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 OR4A2P-201ENST00000527276 913 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 SS18L2P2-201ENST00000583960 235 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RNA5SP108-201ENST00000605921 117 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL591424.2-201ENST00000617023 128 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RN7SL722P-201ENST00000617780 284 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR6729-201ENST00000618194 65 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RN7SL565P-201ENST00000618246 284 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL23AP61-201ENST00000623642 466 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR4278-201ENST00000636094 69 ntBASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNNBIP1Q9NSA3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 USP8P1-201ENST00000494673 3183 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 SNORD35B-201ENST00000363660 87 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 SNORA11.3-201ENST00000408471 128 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 USP9YP9-201ENST00000429406 715 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms