Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 U4.5-201ENST00000617137 123 ntBASIC6□□□□□ -1.45
PDLIM7Q9NR12 AC072046.2-201ENST00000618366 268 ntBASIC6□□□□□ -1.45
PDLIM7Q9NR12 AC073869.10-201ENST00000642016 354 ntBASIC6□□□□□ -1.45
PDLIM7Q9NR12 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 AL034549.2-201ENST00000618285 3373 ntBASIC6□□□□□ -1.45
PDLIM7Q9NR12 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
PDLIM7Q9NR12 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDLIM7Q9NR12 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDLIM7Q9NR12 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 DCAF13P3-201ENST00000561147 1334 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RN7SKP185-201ENST00000362813 326 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RNU6-259P-201ENST00000383999 107 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RNU6-452P-201ENST00000384406 107 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 PIGPP2-201ENST00000411569 458 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RPL21P108-201ENST00000413857 481 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RPS7P13-201ENST00000413955 498 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC073465.2-201ENST00000440938 498 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 ARL5AP2-201ENST00000444698 533 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 GAPDHP25-201ENST00000447061 1001 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AL133244.1-201ENST00000456007 258 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RPL31P58-201ENST00000469001 379 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC004924.1-201ENST00000480160 781 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 FCF1P3-201ENST00000496394 590 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RPS4XP20-201ENST00000505751 772 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 GLUD1P3-202ENST00000508551 200 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC093281.2-201ENST00000510153 597 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 EIF3KP3-201ENST00000514461 639 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RNU6-528P-201ENST00000516926 100 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC118273.2-201ENST00000532092 465 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 OR7K1P-201ENST00000546439 926 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC125494.2-201ENST00000602431 657 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC112220.3-201ENST00000605502 502 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AL138960.1-201ENST00000613838 513 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC006840.1-201ENST00000623069 542 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC099494.2-201ENST00000623371 978 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC016717.3-201ENST00000624730 554 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 AC100757.1-201ENST00000616872 1835 ntBASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM7Q9NR12 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 MTND4P29-201ENST00000503122 1372 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 AC079097.1-201ENST00000512187 1399 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 FGF7P2-201ENST00000332473 296 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 RNU6-621P-201ENST00000364752 109 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 RNU6-348P-201ENST00000384386 107 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 OR6C69P-201ENST00000394268 893 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 AC245052.5-201ENST00000416320 649 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 DPPA2P2-201ENST00000418220 897 ntBASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM7Q9NR12 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms