Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 OR56B2P-201ENST00000317102 954 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 Y_RNA.311-201ENST00000365068 96 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 RNA5SP223-201ENST00000365174 120 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 RNU6-272P-201ENST00000411028 104 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC009238.2-201ENST00000431026 355 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL050321.1-201ENST00000432363 400 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC098826.1-201ENST00000433943 471 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 PPIAP13-201ENST00000434706 478 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 RPL5P25-201ENST00000441148 775 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 UBE2D3P4-201ENST00000441973 436 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC011753.3-201ENST00000443436 406 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 TPT1P13-201ENST00000449760 499 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC009961.3-201ENST00000449832 765 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL513533.1-201ENST00000453728 415 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC092754.2-201ENST00000463506 460 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 MRPS33P2-201ENST00000507850 322 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 IGKV1-32-201ENST00000519290 311 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AP001207.1-201ENST00000524051 481 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 GSTP1P1-201ENST00000548078 319 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC009852.2-201ENST00000567898 485 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC091042.1-201ENST00000579213 173 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC010632.3-201ENST00000611377 369 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC005332.6-201ENST00000613178 446 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC010608.2-201ENST00000624830 470 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 ABCC13-202ENST00000463099 3842 ntBASIC5.71□□□□□ -1.5
VTA1Q9NP79 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 SUGT1P1-201ENST00000379514 476 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 SNORA2.3-201ENST00000383920 135 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 RNA5SP187-201ENST00000384400 119 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 RNU6-1151P-201ENST00000384684 107 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 MIR141-201ENST00000384975 95 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 SNORA48.4-201ENST00000391089 134 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 RNA5SP113-201ENST00000410486 84 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 QRSL1P2-201ENST00000418582 964 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC011233.1-201ENST00000422812 283 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 RPL19P16-201ENST00000433839 588 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 ISCA1P2-201ENST00000438679 421 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC023271.1-201ENST00000445936 1090 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 TCEA1P1-201ENST00000449716 880 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009220.1-201ENST00000451614 275 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 MTND1P16-201ENST00000465177 898 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 RPL21P71-201ENST00000465598 459 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC008897.1-201ENST00000494006 347 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC008494.2-201ENST00000514544 370 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AP001189.2-201ENST00000527320 189 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms