Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP003400.2-201ENST00000624036 666 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AL356121.2-201ENST00000624715 780 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 OR5BE1P-202ENST00000641168 1176 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 MIR483-201ENST00000385070 76 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 RPL23AP48-201ENST00000406913 488 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 TPT1P2-201ENST00000413105 503 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 RAB9AP4-201ENST00000415230 609 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AL391219.1-201ENST00000422570 483 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 COX6CP15-201ENST00000426313 211 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AC087650.1-201ENST00000431445 468 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 YWHAEP5-201ENST00000431545 765 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 UBE2V2P4-201ENST00000447495 259 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AC092691.2-201ENST00000461787 803 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AC018442.3-201ENST00000523025 183 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AC090312.1-201ENST00000580637 348 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AL451086.1-201ENST00000605596 223 ntBASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF3BQ9BZI7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 SNORA60-201ENST00000362396 134 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RNU6-984P-201ENST00000363236 109 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RNA5SP399-201ENST00000364003 117 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 GCNT6-201ENST00000379591 934 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 HMGB3P19-201ENST00000403971 560 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 OR8G2P-201ENST00000412796 908 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 MTND2P11-201ENST00000423638 648 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 NPM1P34-201ENST00000428821 893 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AL117339.2-201ENST00000430475 180 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC006326.1-201ENST00000445465 787 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 MTND4LP12-201ENST00000448237 295 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 FABP3P2-201ENST00000453169 399 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 CCDC75P1-201ENST00000469247 791 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RPL23AP2-201ENST00000471227 466 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RN7SL809P-201ENST00000482040 297 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RPL7P24-201ENST00000493052 752 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC103858.2-201ENST00000621471 543 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC124312.6-202ENST00000623624 418 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC010608.2-201ENST00000624830 470 ntBASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPF3BQ9BZI7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 USP9YP4-201ENST00000424401 1745 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 SNORA71.3-201ENST00000362582 128 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 RNU6-178P-201ENST00000384631 104 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 MIR7-3-201ENST00000384898 110 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC091390.3-201ENST00000426478 338 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC104306.1-201ENST00000449702 371 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC069499.1-201ENST00000489433 509 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC109458.1-201ENST00000508858 316 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC026726.1-201ENST00000512859 601 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms