Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 FKBP1BP1-201ENST00000553366 325 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AC093249.4-201ENST00000564755 259 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 RN7SL52P-201ENST00000584271 284 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AC073091.2-201ENST00000603205 907 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 BNIP3P4-201ENST00000604946 565 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 RN7SL722P-201ENST00000617780 284 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 U73479.1-201ENST00000618062 168 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 RN7SL565P-201ENST00000618246 284 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AP006248.3-201ENST00000623580 594 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AL731532.2-201ENST00000623542 1953 ntBASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4AQ9BY43 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
CHMP4AQ9BY43 AC012020.1-201ENST00000624541 1728 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC007685.1-201ENST00000329806 452 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AL590240.1-201ENST00000334118 313 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 CYB5AP4-201ENST00000396692 399 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AL049697.2-201ENST00000403708 294 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 EI24P1-201ENST00000416584 867 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 E2F6P2-201ENST00000420708 748 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 FTH1P6-201ENST00000430768 320 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 CEACAMP9-201ENST00000442990 513 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC011753.3-201ENST00000443436 406 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 GTF2IP12-201ENST00000456547 356 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 CYCSP20-201ENST00000473154 315 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC108145.1-201ENST00000503770 153 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 MIR8084-201ENST00000614105 89 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AL356094.1-201ENST00000624663 1212 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 AC025263.3-201ENST00000622965 1396 ntBASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.02□□□□□ -1.45
CHMP4AQ9BY43 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 RNU6-77P-201ENST00000410554 91 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 CYCSP10-201ENST00000417973 294 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 YWHAEP5-201ENST00000431545 765 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 RPL36AP15-201ENST00000444514 266 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 TVP23BP2-201ENST00000455082 615 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC010307.1-201ENST00000467206 836 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC078817.1-201ENST00000492623 435 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 RPL36AP41-201ENST00000493820 306 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 FTH1P9-201ENST00000513251 355 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 OR8K4P-201ENST00000534608 872 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC090616.5-202ENST00000582111 297 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AP002906.1-201ENST00000603405 233 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC005972.3-201ENST00000606304 481 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC121761.2-201ENST00000617300 689 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 U3.53-201ENST00000628922 216 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC138649.5-201ENST00000637456 137 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AL512283.1-201ENST00000606756 1384 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC108467.2-201ENST00000617640 1597 ntBASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CHMP4AQ9BY43 AC108751.5-201ENST00000492880 1336 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms