Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 STMN1P2-201ENST00000508435 439 ntBASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC233280.2-201ENST00000603917 1070 ntBASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC079298.2-201ENST00000623885 459 ntBASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC138627.1-204ENST00000641894 765 ntBASIC5.79□□□□□ -1.48
SCAPERQ9BY12 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 RNU1-33P-201ENST00000364249 162 ntBASIC5.78□□□□□ -1.48
SCAPERQ9BY12 MIR128-1-201ENST00000384921 82 ntBASIC5.78□□□□□ -1.48
SCAPERQ9BY12 DYNLL1P7-201ENST00000429273 258 ntBASIC5.78□□□□□ -1.48
SCAPERQ9BY12 RN7SL271P-201ENST00000487601 295 ntBASIC5.78□□□□□ -1.48
SCAPERQ9BY12 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 AC026979.4-201ENST00000606555 645 ntBASIC5.78□□□□□ -1.48
SCAPERQ9BY12 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.78□□□□□ -1.48
SCAPERQ9BY12 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 OR6K3-202ENST00000368146 996 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AC234772.1-201ENST00000377927 937 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AL122016.1-201ENST00000403365 367 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 RNA5SP296-201ENST00000410523 111 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 RPL5P16-201ENST00000471467 790 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AL049873.1-201ENST00000480540 376 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AC027807.1-201ENST00000559921 996 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 MIR8058-201ENST00000615737 89 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AL139089.1-201ENST00000620372 975 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 AC009229.4-201ENST00000623854 1947 ntBASIC5.77□□□□□ -1.49
SCAPERQ9BY12 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.77□□□□□ -1.49
SCAPERQ9BY12 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RNU1-15P-201ENST00000353977 144 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RNU1-108P-201ENST00000362556 161 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 SNORA3C-201ENST00000408792 125 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC010740.1-201ENST00000417035 684 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 MTND6P6-201ENST00000478031 263 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RN7SL809P-201ENST00000482040 297 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AP000563.1-201ENST00000490865 758 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RNA5SP164-201ENST00000516533 110 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC022882.1-201ENST00000532142 501 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC069240.1-201ENST00000548774 375 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC104662.1-201ENST00000604448 511 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AL513477.2-201ENST00000607858 568 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC015922.4-201ENST00000612568 690 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC139713.2-215ENST00000641428 5037 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 NAMPTP1-201ENST00000440465 2514 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 AC007529.1-201ENST00000418574 2178 ntBASIC5.76□□□□□ -1.49
SCAPERQ9BY12 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCAPERQ9BY12 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AL121834.1-202ENST00000404494 277 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 MIR1251-201ENST00000408552 70 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AC005326.1-201ENST00000429197 123 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AC073063.1-201ENST00000434352 607 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 GEMIN8P3-201ENST00000445417 720 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 OR4A12P-201ENST00000530847 918 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms