Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RPL30P2-201ENST00000414021 291 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 GJA6P-201ENST00000415117 1042 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 GRPEL2P2-201ENST00000421856 670 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL590135.1-201ENST00000422215 156 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC115283.1-201ENST00000427353 400 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC096775.1-201ENST00000437724 448 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC105402.2-201ENST00000438503 358 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 RPS7P3-201ENST00000443360 580 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC073910.1-201ENST00000445047 438 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 MTND4LP30-201ENST00000454092 297 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 RNU7-59P-201ENST00000459101 61 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 DYNLL1P5-201ENST00000467158 270 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC006967.1-201ENST00000467608 589 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AP002812.1-201ENST00000495378 474 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC010350.1-201ENST00000504908 231 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL049779.2-201ENST00000553847 315 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL049869.4-201ENST00000555669 178 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 OR5AH1P-201ENST00000595968 283 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL352984.2-202ENST00000613699 155 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 AL512643.1-201ENST00000635735 524 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 MAPK10-287ENST00000641217 3037 ntBASIC6.66□□□□□ -1.34
USB1Q9BQ65 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USB1Q9BQ65 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
USB1Q9BQ65 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 SNX18P3-202ENST00000565670 1750 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 LST1-211ENST00000376110 433 ntTSL 3 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 Y_RNA.562-201ENST00000384695 113 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC113608.1-201ENST00000398740 305 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 U3.31-201ENST00000408113 216 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 MIR548I2-201ENST00000408348 149 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 GTF2F2P2-201ENST00000445825 721 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AL445687.2-201ENST00000458156 728 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 TDGF1P6-201ENST00000463873 448 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 RN7SL58P-201ENST00000473445 294 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 RN7SL182P-201ENST00000496499 300 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 MIR3910-1-201ENST00000580936 111 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AL021918.2-201ENST00000613415 194 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 pRNA.12-201ENST00000614353 90 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 pRNA.3-201ENST00000615048 90 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 AC073488.8-201ENST00000631952 757 ntBASIC6.65□□□□□ -1.34
USB1Q9BQ65 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
USB1Q9BQ65 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USB1Q9BQ65 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms