Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL139174.1-201ENST00000531489 886 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 AP000873.5-201ENST00000533906 236 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC068993.1-201ENST00000546724 589 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 WISP1-OT1-201ENST00000602893 642 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC090181.2-201ENST00000602975 672 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC008814.1-201ENST00000603797 406 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 Z95327.3-201ENST00000610385 572 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC100793.4-201ENST00000613683 429 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC100827.5-201ENST00000615883 426 ntBASIC6.11□□□□□ -1.43
DDX11Q96FC9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX11Q96FC9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX11Q96FC9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
DDX11Q96FC9 TTC39DP-201ENST00000416781 1688 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AP000776.1-201ENST00000530032 1663 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC093849.1-201ENST00000563631 2209 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC104623.2-202ENST00000623477 4002 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AL391994.1-201ENST00000254724 282 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 RNY3P14-201ENST00000384309 102 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 MIR600-201ENST00000385007 98 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AL109941.1-201ENST00000401925 229 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AL079342.2-201ENST00000403367 482 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 ZNF603P-201ENST00000405613 487 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 RN7SKP216-201ENST00000411050 312 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 USP9YP33-201ENST00000412220 421 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 LINC01347-201ENST00000417964 355 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 RPS26P13-201ENST00000419030 330 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 RBMY2QP-201ENST00000429799 1147 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 OR2B8P-201ENST00000432841 938 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 PA2G4P6-201ENST00000438325 1197 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC006466.1-201ENST00000438721 289 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 DNAJB5P1-201ENST00000454004 806 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC079168.1-201ENST00000458741 345 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 CDC42P4-201ENST00000510507 563 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 GTF2F2P1-201ENST00000511083 675 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 snoZ278.1-201ENST00000517059 112 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 OR8A2P-201ENST00000528631 952 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC027104.1-201ENST00000563702 681 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC116553.2-201ENST00000564203 463 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 MTCO3P24-201ENST00000572729 782 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC006270.3-201ENST00000605967 1036 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC080013.4-201ENST00000607624 649 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC138749.5-201ENST00000611461 208 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 MIR6798-201ENST00000612887 67 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC109454.4-201ENST00000623411 649 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC063976.2-201ENST00000425667 3556 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX11Q96FC9 AC073544.1-201ENST00000600110 1595 ntBASIC6.1□□□□□ -1.43
DDX11Q96FC9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
DDX11Q96FC9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX11Q96FC9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX11Q96FC9 AC000367.1-201ENST00000452711 1766 ntBASIC6.09□□□□□ -1.43
DDX11Q96FC9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX11Q96FC9 AC087359.1-201ENST00000508335 1740 ntBASIC6.09□□□□□ -1.43
DDX11Q96FC9 RNA5SP27-201ENST00000363839 119 ntBASIC6.09□□□□□ -1.43
DDX11Q96FC9 RNU6-694P-201ENST00000364071 147 ntBASIC6.09□□□□□ -1.43
DDX11Q96FC9 RNA5SP223-201ENST00000365174 120 ntBASIC6.09□□□□□ -1.43
DDX11Q96FC9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms