Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC107982.1-201ENST00000507171 1300 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 ZNF833P-201ENST00000424938 1494 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 Y_RNA.18-201ENST00000362461 102 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RNU6-582P-201ENST00000362989 107 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RN7SKP113-201ENST00000363891 295 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SNORA2.3-201ENST00000383920 135 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RNA5SP187-201ENST00000384400 119 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 MT-TH-201ENST00000387441 69 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RPL23AP47-201ENST00000408017 460 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 U3.32-201ENST00000408116 212 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RN7SKP114-201ENST00000410327 279 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RNU2-6P-201ENST00000411404 190 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AL589823.1-201ENST00000429577 183 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AL513175.1-201ENST00000431492 780 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC008072.1-201ENST00000434254 824 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC004865.1-201ENST00000442276 1003 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 MTND2P19-201ENST00000449129 1012 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RPL23AP35-201ENST00000451906 501 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 BX284632.1-201ENST00000478218 541 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 MTATP6P22-201ENST00000507369 598 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC093281.2-201ENST00000510153 597 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 MTCO1P30-201ENST00000515244 580 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RNU6-885P-201ENST00000516607 104 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SMARCE1P4-201ENST00000523647 241 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 OR11J2P-201ENST00000555298 907 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC091488.1-201ENST00000604239 660 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC018714.1-201ENST00000605028 208 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC112220.3-201ENST00000605502 502 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC091946.2-201ENST00000606105 291 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC008083.4-201ENST00000615076 444 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC073429.2-201ENST00000569694 1444 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 ADAM5-202ENST00000399789 1942 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AL121839.2-201ENST00000565058 6943 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SOCS5P3-201ENST00000425115 1576 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 AC011755.1-201ENST00000623763 2049 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 MTND4P5-201ENST00000435821 1374 ntBASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTHRC1Q96CG8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 SNORA4.1-201ENST00000364263 144 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 Y_RNA.408-201ENST00000383987 102 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 RN7SKP16-201ENST00000410180 299 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 RNA5SP296-201ENST00000410523 111 ntBASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
CTHRC1Q96CG8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms