Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 MIR383-201ENST00000362257 73 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 RNU6-146P-201ENST00000384602 108 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AL161909.1-201ENST00000397390 712 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 MIR1251-201ENST00000408552 70 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AL356806.1-201ENST00000422524 916 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 COX6B1P7-201ENST00000430845 235 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC073143.1-201ENST00000436316 395 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 CCRL1P1-201ENST00000449542 1053 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 IFNWP4-201ENST00000453148 294 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC109327.1-201ENST00000471666 403 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 UQCRHP4-201ENST00000471686 272 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 S100A11P1-201ENST00000477525 312 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 RPL29P14-201ENST00000495837 428 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC106806.2-201ENST00000509365 500 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC026726.1-201ENST00000512859 601 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC099522.1-202ENST00000514718 367 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC010200.2-201ENST00000605098 235 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC073111.2-201ENST00000605657 1075 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 BX322635.1-201ENST00000605804 496 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AC020658.4-201ENST00000613987 684 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 MIR3653-201ENST00000625572 110 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 AL627171.1-201ENST00000618845 1308 ntBASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RTN4IP1Q8WWV3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 SNORD35B-201ENST00000363660 87 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 RPL7P4-203ENST00000430239 730 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 RPL31P20-201ENST00000449593 360 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 RNA5SP246-201ENST00000458909 119 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 PPIAP21-201ENST00000464473 501 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 RN7SL481P-201ENST00000477764 299 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC091167.1-201ENST00000492017 396 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 RNU6-319P-201ENST00000516025 108 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 IGHV3-32-201ENST00000519182 355 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC092868.3-201ENST00000560515 784 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC022655.2-201ENST00000577280 318 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC022387.2-201ENST00000604050 448 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AL591424.2-201ENST00000617023 128 ntBASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RTN4IP1Q8WWV3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL049555.1-201ENST00000562834 1933 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms