Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL359955.1-201ENST00000455242 3275 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC023421.1-201ENST00000590535 1785 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC092104.1-201ENST00000497346 1441 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AP002907.1-201ENST00000606361 1430 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 SNORA67-201ENST00000384423 137 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RNA5SP339-201ENST00000390987 122 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MTCYBP36-201ENST00000404146 440 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AL133384.1-201ENST00000412744 351 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MTCO3P41-201ENST00000414801 328 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC006366.1-201ENST00000422002 759 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 CYCSP46-201ENST00000423569 204 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RPL12P34-201ENST00000424532 479 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC108075.1-201ENST00000424692 529 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 COX6CP15-201ENST00000426313 211 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RPL12P46-201ENST00000436610 195 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 TRIM60P18-201ENST00000441518 828 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 H2AFZP6-201ENST00000444403 394 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 EPS15P1-201ENST00000448836 336 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AL389915.2-201ENST00000454576 441 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 APOOP2-201ENST00000461561 539 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC109462.1-201ENST00000491087 368 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 ST13P12-201ENST00000508958 1094 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RNA5SP216-201ENST00000516111 123 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 OR4A45P-201ENST00000529954 901 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MIR5186-201ENST00000577504 120 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 BNIP3P23-201ENST00000599655 511 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC068276.1-201ENST00000605793 379 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MIR6748-201ENST00000610433 71 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC090510.2-201ENST00000617465 629 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 MIR6864-201ENST00000617935 70 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC025048.6-202ENST00000627667 438 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC084035.1-201ENST00000634543 607 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 U6.101-201ENST00000637707 76 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC114546.3-201ENST00000623582 1734 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 AC004656.1-201ENST00000568479 4951 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SYNPOQ8N3V7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RPL23P2-201ENST00000320371 421 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RNU6-462P-201ENST00000362659 105 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms