Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 RNA5SP105-201ENST00000391123 113 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 ENSAP1-201ENST00000392855 326 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 MRPL50P1-201ENST00000431951 384 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC092013.1-201ENST00000438795 332 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 CCRL1P1-201ENST00000449542 1053 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 SNRPGP5-201ENST00000456003 220 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AL133477.1-201ENST00000457472 514 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC010618.1-201ENST00000469924 477 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 METTL15P1-201ENST00000481421 1045 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 MTND3P6-201ENST00000485242 339 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 SNORA31.9-201ENST00000516429 84 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 MRPL49P2-201ENST00000521066 465 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 MTND2P13-201ENST00000577438 1039 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 RN7SL600P-201ENST00000581811 299 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 GMCL1P2-201ENST00000605230 823 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC110741.2-201ENST00000605278 268 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 BNIP3P7-201ENST00000605641 516 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC007620.3-201ENST00000608131 497 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AL590410.1-201ENST00000617925 333 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 AC020763.5-201ENST00000623298 430 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 OR52H1-202ENST00000641796 1061 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 ZNF962P-201ENST00000443465 3140 ntBASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC126755.2-208ENST00000327792 462 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC138969.1-213ENST00000331436 462 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 ST13P16-201ENST00000401760 781 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 MIR1251-201ENST00000408552 70 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 RNA5SP39-201ENST00000411245 120 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AMD1P2-201ENST00000412936 992 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 TPT1P2-201ENST00000413105 503 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AL138785.1-201ENST00000425821 331 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 OR5BE1P-201ENST00000425977 939 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 HMGB3P21-201ENST00000452483 547 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 RPL5P32-201ENST00000454085 879 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 NDUFA5P9-201ENST00000472609 340 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 IGBP1P5-201ENST00000507524 1000 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 HPRT1P1-201ENST00000509498 657 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC022968.1-201ENST00000567372 442 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AC128687.2-201ENST00000609657 566 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AL136295.6-201ENST00000610486 658 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 MIR6716-201ENST00000613413 80 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 AL356274.1-201ENST00000617064 410 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 OR5BE1P-202ENST00000641168 1176 ntBASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC65Q8IXS2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 RNU4-23P-201ENST00000362839 140 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 RNA5SP306-201ENST00000411087 107 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 JKAMPP1-201ENST00000413804 919 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms