Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AP005432.2-201ENST00000608162 586 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 Z95327.3-201ENST00000610385 572 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC023158.2-201ENST00000614876 543 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC138932.5-201ENST00000617759 563 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC072046.2-201ENST00000618366 268 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC087821.2-201ENST00000637086 450 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SMG1P7-201ENST00000565246 2704 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC093849.1-201ENST00000563631 2209 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 RNY4P24-201ENST00000362735 96 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 RNA5SP223-201ENST00000365174 120 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 RNA5SP187-201ENST00000384400 119 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 MIR323B-201ENST00000385269 82 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 snosnR66.1-201ENST00000391095 99 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 BTF3P7-201ENST00000407097 488 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 RNA5SP80-201ENST00000410475 111 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AP000534.2-201ENST00000412729 568 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC245052.5-201ENST00000416320 649 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 CCDC58P2-201ENST00000417131 366 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC004448.2-201ENST00000422360 586 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AL161722.2-201ENST00000434731 981 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SNRPEP8-201ENST00000442866 260 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC097499.1-201ENST00000444277 208 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AL591363.1-201ENST00000450091 483 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 BX284632.1-201ENST00000478218 541 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 RN7SL30P-201ENST00000488416 306 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC109445.1-201ENST00000512356 383 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC098976.1-201ENST00000513014 541 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 RNU6-1334P-201ENST00000516032 105 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC025881.1-201ENST00000518851 512 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SMARCE1P4-201ENST00000523647 241 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AP001207.1-201ENST00000524051 481 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC090022.1-201ENST00000546569 311 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SNORA59B-202ENST00000578183 701 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 PRPF19P1-201ENST00000584766 898 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SUMO2P15-201ENST00000604285 278 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC009220.3-201ENST00000604318 586 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 MIR7844-201ENST00000616161 122 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC135068.12-201ENST00000637370 931 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 AC005005.4-201ENST00000623789 16698 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 PANDAR-201ENST00000629595 1506 ntBASIC5.07□□□□□ -1.6
VRK3Q8IV63 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK3Q8IV63 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK3Q8IV63 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL022311.1-201ENST00000623726 19416 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms