Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 ERHP2-201ENST00000402323 299 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RPS26P13-201ENST00000419030 330 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC234781.4-201ENST00000419384 244 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 HIGD1AP12-201ENST00000427832 281 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 NRBF2P3-201ENST00000432731 865 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 HSFY3P-201ENST00000444242 1191 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RPL31P44-201ENST00000447680 377 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 OR51B8P-201ENST00000449892 769 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC233982.1-201ENST00000451247 436 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 VN1R32P-201ENST00000452234 905 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 NPM1P13-201ENST00000452663 865 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC108734.3-201ENST00000481241 1165 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC091544.1-201ENST00000484702 348 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RPS4XP18-201ENST00000495480 763 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 XKRY-201ENST00000510392 1100 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 MTCO2P32-201ENST00000514865 403 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RFPL1S-203ENST00000539579 330 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC006518.2-201ENST00000542513 940 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 OR1F2P-201ENST00000570470 933 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 MIR4443-201ENST00000585052 53 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AP001269.3-201ENST00000588718 329 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 DEFB131E-202ENST00000602581 683 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AL031320.1-201ENST00000604177 357 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC064872.1-201ENST00000604823 1072 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC087752.4-201ENST00000605911 462 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AC234782.5-201ENST00000617723 324 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL356473.1-201ENST00000406203 1408 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 OR56B2P-201ENST00000317102 954 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 FAM133CP-201ENST00000332869 704 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 OR13C3-201ENST00000374781 1108 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 SNORD65C-201ENST00000390962 71 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL590084.1-201ENST00000407885 387 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 Y_RNA.619-201ENST00000410951 90 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC010385.1-201ENST00000412374 256 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL591848.1-201ENST00000413092 322 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 Z74021.1-201ENST00000423610 407 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MOB1AP1-201ENST00000430903 535 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL138787.1-202ENST00000437804 898 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 COX7BP2-201ENST00000437976 242 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MTND5P2-201ENST00000442927 1142 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 Z80107.2-201ENST00000445127 392 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 USP9YP10-201ENST00000454868 628 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 NECAP1P2-201ENST00000455668 727 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL133477.1-201ENST00000457472 514 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 RNU7-125P-201ENST00000458760 62 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC107015.1-201ENST00000466902 747 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 USP9YP5-201ENST00000511770 630 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MTCYBP20-201ENST00000524239 1129 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 DEFB130C-202ENST00000530001 230 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC011611.5-201ENST00000552477 578 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms