Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.81□□□□□ -1.8
RFX4Q33E94 AC010680.3-201ENST00000604215 520 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC084036.1-201ENST00000609190 508 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.81□□□□□ -1.8
RFX4Q33E94 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.81□□□□□ -1.8
RFX4Q33E94 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
RFX4Q33E94 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
RFX4Q33E94 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFX4Q33E94 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFX4Q33E94 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RFX4Q33E94 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFX4Q33E94 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFX4Q33E94 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 RNVU1-6-201ENST00000364688 164 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 MIR92A2-201ENST00000385299 75 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AL583835.1-201ENST00000399570 407 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 RPS3AP23-201ENST00000401762 784 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AL590139.1-201ENST00000416267 400 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC069213.2-201ENST00000420238 366 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC073069.1-201ENST00000428657 441 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.8□□□□□ -1.8
RFX4Q33E94 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 RPL23AP46-201ENST00000438548 490 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 PHBP16-201ENST00000446318 950 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AP002345.1-201ENST00000456493 928 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AC021146.7-201ENST00000509604 775 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 RNU6-760P-201ENST00000516078 97 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 IGKV2D-23-201ENST00000518179 286 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC026616.1-201ENST00000523157 525 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 VN1R84P-201ENST00000593697 235 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 MIMT1-201ENST00000597105 1050 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC005229.3-201ENST00000603438 323 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 KATNBL1P1-201ENST00000605192 748 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.8□□□□□ -1.8
RFX4Q33E94 CFTRP2-201ENST00000634304 199 ntBASIC3.8□□□□□ -1.8
RFX4Q33E94 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RFX4Q33E94 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.8□□□□□ -1.8
RFX4Q33E94 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
RFX4Q33E94 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFX4Q33E94 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.8□□□□□ -1.8
RFX4Q33E94 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.79□□□□□ -1.8
RFX4Q33E94 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 MIR129-1-201ENST00000384972 72 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RFX4Q33E94 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.79□□□□□ -1.8
RFX4Q33E94 GSTA12P-201ENST00000402398 508 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC115285.1-201ENST00000424879 736 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AL590623.1-201ENST00000427864 105 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 RPL23AP1-201ENST00000428990 471 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AL513343.1-201ENST00000451818 792 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AL645939.1-201ENST00000453429 797 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 RN7SL738P-201ENST00000470264 297 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 ACTR6P1-201ENST00000514311 1104 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC063949.1-201ENST00000552900 865 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AL133457.1-201ENST00000564251 987 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms