Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 OR2AS2P-201ENST00000606902 342 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 AC087241.4-201ENST00000612441 480 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 HIGD1AP4-201ENST00000430194 280 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.64□□□□□ -1.99
PRKDCP78527 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.64□□□□□ -1.99
PRKDCP78527 AL109933.2-201ENST00000452651 260 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
PRKDCP78527 AC106734.1-201ENST00000568646 663 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 RNVU1-4-201ENST00000612985 164 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRKDCP78527 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 HMGB1P18-201ENST00000438801 619 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 AL645931.1-201ENST00000439737 410 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.64□□□□□ -1.99
PRKDCP78527 AC124312.4-201ENST00000605533 310 ntBASIC2.64□□□□□ -1.99
PRKDCP78527 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
PRKDCP78527 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
PRKDCP78527 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PRKDCP78527 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.63□□□□□ -1.99
PRKDCP78527 RPF2P1-201ENST00000424137 906 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 AC091826.1-201ENST00000514065 313 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.63□□□□□ -1.99
PRKDCP78527 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 AC015802.5-201ENST00000607478 399 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 NPM1P37-201ENST00000403105 874 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AL359643.1-201ENST00000404109 423 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 LIPT1P1-201ENST00000415870 1186 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 OR6K4P-201ENST00000423179 955 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC000041.1-201ENST00000439655 175 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.63□□□□□ -1.99
PRKDCP78527 AC006445.1-201ENST00000491925 405 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC090151.1-201ENST00000520784 730 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC018442.3-201ENST00000523025 183 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC063950.1-201ENST00000552036 308 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 AC009852.2-201ENST00000567898 485 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.63□□□□□ -1.99
PRKDCP78527 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 SNORA5B-201ENST00000363786 132 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 AL024507.1-201ENST00000412741 274 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 UBTFL3-201ENST00000418934 1024 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 MRPS33P4-201ENST00000434892 317 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 AC097262.1-201ENST00000452559 548 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 UBTFL6-201ENST00000477929 1024 ntBASIC2.63□□□□□ -1.99
PRKDCP78527 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.63□□□□□ -1.99
PRKDCP78527 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.63□□□□□ -1.99
PRKDCP78527 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PRKDCP78527 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRKDCP78527 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PRKDCP78527 OTUD4P1-201ENST00000237841 3067 ntBASIC2.62□□□□□ -1.99
PRKDCP78527 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRKDCP78527 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRKDCP78527 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms