Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.54□□□□□ -2
RPL39P62891 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RPL39P62891 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.53□□□□□ -2
RPL39P62891 AL356489.2-201ENST00000566968 3528 ntBASIC2.53□□□□□ -2
RPL39P62891 BRAFP1-201ENST00000445336 2703 ntBASIC2.53□□□□□ -2
RPL39P62891 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 RNU6-984P-201ENST00000363236 109 ntBASIC2.53□□□□□ -2
RPL39P62891 MT-RNR1-201ENST00000389680 954 ntBASIC2.53□□□□□ -2
RPL39P62891 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.53□□□□□ -2
RPL39P62891 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 ZNF602P-201ENST00000405929 924 ntBASIC2.53□□□□□ -2
RPL39P62891 RPL21P65-201ENST00000406094 466 ntBASIC2.53□□□□□ -2
RPL39P62891 HMGB3P18-201ENST00000406327 590 ntBASIC2.53□□□□□ -2
RPL39P62891 RPS12P23-201ENST00000419579 400 ntBASIC2.53□□□□□ -2
RPL39P62891 RPS15AP6-201ENST00000420703 385 ntBASIC2.53□□□□□ -2
RPL39P62891 COX6CP17-201ENST00000421389 185 ntBASIC2.53□□□□□ -2
RPL39P62891 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AL592293.2-201ENST00000422292 996 ntBASIC2.53□□□□□ -2
RPL39P62891 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC2.53□□□□□ -2
RPL39P62891 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.53□□□□□ -2
RPL39P62891 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.53□□□□□ -2
RPL39P62891 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.53□□□□□ -2
RPL39P62891 RPL6P9-201ENST00000466502 859 ntBASIC2.53□□□□□ -2
RPL39P62891 AC087312.1-201ENST00000471411 480 ntBASIC2.53□□□□□ -2
RPL39P62891 CYCSP20-201ENST00000473154 315 ntBASIC2.53□□□□□ -2
RPL39P62891 PRELID3BP7-201ENST00000503606 469 ntBASIC2.53□□□□□ -2
RPL39P62891 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 NPM1P6-201ENST00000521088 871 ntBASIC2.53□□□□□ -2
RPL39P62891 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.53□□□□□ -2
RPL39P62891 AC137768.1-201ENST00000549998 553 ntBASIC2.53□□□□□ -2
RPL39P62891 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AC106785.3-201ENST00000564064 847 ntBASIC2.53□□□□□ -2
RPL39P62891 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.53□□□□□ -2
RPL39P62891 AC011477.5-201ENST00000586571 259 ntBASIC2.53□□□□□ -2
RPL39P62891 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.53□□□□□ -2
RPL39P62891 AC006077.1-201ENST00000604746 343 ntBASIC2.53□□□□□ -2
RPL39P62891 AC007390.2-201ENST00000606229 3803 ntBASIC2.53□□□□□ -2
RPL39P62891 AL021707.7-201ENST00000607991 416 ntBASIC2.53□□□□□ -2
RPL39P62891 AC004825.2-201ENST00000616634 455 ntBASIC2.53□□□□□ -2
RPL39P62891 AL445567.2-201ENST00000618935 498 ntBASIC2.53□□□□□ -2
RPL39P62891 MIR6500-201ENST00000622700 86 ntBASIC2.53□□□□□ -2
RPL39P62891 AP000346.3-201ENST00000622821 210 ntBASIC2.53□□□□□ -2
RPL39P62891 AL732618.1-201ENST00000623251 301 ntBASIC2.53□□□□□ -2
RPL39P62891 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.53□□□□□ -2
RPL39P62891 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 ASNSP1-204ENST00000641977 1664 ntBASIC2.53□□□□□ -2
RPL39P62891 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.53□□□□□ -2
RPL39P62891 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL39P62891 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RPL39P62891 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
RPL39P62891 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 AC027228.2-201ENST00000567141 2154 ntBASIC2.52□□□□□ -2.01
RPL39P62891 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RPL39P62891 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RPL39P62891 U1.1-201ENST00000384101 164 ntBASIC2.52□□□□□ -2.01
RPL39P62891 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RPL39P62891 HSPD1P16-201ENST00000402302 394 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC068533.1-201ENST00000418542 415 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC007394.1-201ENST00000421941 531 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC009480.2-201ENST00000422916 432 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AL390879.2-203ENST00000426943 1121 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC245517.2-201ENST00000442890 346 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL39P62891 NUTF2P3-201ENST00000448540 384 ntBASIC2.52□□□□□ -2.01
RPL39P62891 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL39P62891 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL39P62891 RPL7L1P8-201ENST00000469911 741 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC022034.3-201ENST00000471393 478 ntBASIC2.52□□□□□ -2.01
RPL39P62891 RN7SL442P-201ENST00000473804 320 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC117394.1-201ENST00000477323 567 ntBASIC2.52□□□□□ -2.01
RPL39P62891 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 FABP5P12-201ENST00000515543 389 ntBASIC2.52□□□□□ -2.01
RPL39P62891 RNU2-27P-201ENST00000516185 142 ntBASIC2.52□□□□□ -2.01
RPL39P62891 RNU6-352P-201ENST00000516908 107 ntBASIC2.52□□□□□ -2.01
RPL39P62891 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AP001636.2-201ENST00000525517 696 ntBASIC2.52□□□□□ -2.01
RPL39P62891 GTF2IP11-201ENST00000526931 420 ntBASIC2.52□□□□□ -2.01
RPL39P62891 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.52□□□□□ -2.01
RPL39P62891 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL39P62891 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL39P62891 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms