Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.46□□□□□ -1.69
ACLYP53396 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.46□□□□□ -1.7
ACLYP53396 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.46□□□□□ -1.7
ACLYP53396 BTBD10P1-201ENST00000549824 1352 ntBASIC4.46□□□□□ -1.7
ACLYP53396 IL6STP1-201ENST00000346911 1020 ntBASIC4.46□□□□□ -1.7
ACLYP53396 MIR34B-201ENST00000385076 84 ntBASIC4.46□□□□□ -1.7
ACLYP53396 SNORA68.2-201ENST00000391263 128 ntBASIC4.46□□□□□ -1.7
ACLYP53396 RPL21P17-201ENST00000397467 475 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AL450992.3-201ENST00000413192 568 ntBASIC4.46□□□□□ -1.7
ACLYP53396 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 MTCYBP7-201ENST00000419540 1134 ntBASIC4.46□□□□□ -1.7
ACLYP53396 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 AC091390.3-201ENST00000426478 338 ntBASIC4.46□□□□□ -1.7
ACLYP53396 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
ACLYP53396 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 ARL4AP3-201ENST00000441452 574 ntBASIC4.46□□□□□ -1.7
ACLYP53396 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 CCRL1P1-201ENST00000449542 1053 ntBASIC4.46□□□□□ -1.7
ACLYP53396 C1DP3-201ENST00000455013 423 ntBASIC4.46□□□□□ -1.7
ACLYP53396 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.46□□□□□ -1.7
ACLYP53396 RN7SL809P-201ENST00000482040 297 ntBASIC4.46□□□□□ -1.7
ACLYP53396 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 RPS3AP6-201ENST00000484430 795 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.46□□□□□ -1.7
ACLYP53396 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.46□□□□□ -1.7
ACLYP53396 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.46□□□□□ -1.7
ACLYP53396 AC022882.1-201ENST00000532142 501 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC084033.1-201ENST00000550830 633 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.46□□□□□ -1.7
ACLYP53396 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.46□□□□□ -1.7
ACLYP53396 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.46□□□□□ -1.7
ACLYP53396 AC027281.1-201ENST00000574178 758 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC087499.8-201ENST00000578406 226 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.46□□□□□ -1.7
ACLYP53396 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.46□□□□□ -1.7
ACLYP53396 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 AC091167.4-201ENST00000605079 184 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.46□□□□□ -1.7
ACLYP53396 AL391497.1-201ENST00000608671 547 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC005344.1-201ENST00000613391 459 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AC090246.1-201ENST00000616499 426 ntBASIC4.46□□□□□ -1.7
ACLYP53396 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 Z82217.1-201ENST00000625157 8149 ntBASIC4.46□□□□□ -1.7
ACLYP53396 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACLYP53396 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
ACLYP53396 AP004289.2-201ENST00000444413 1457 ntBASIC4.45□□□□□ -1.7
ACLYP53396 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
ACLYP53396 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
ACLYP53396 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 SNORD35B-201ENST00000363660 87 ntBASIC4.45□□□□□ -1.7
ACLYP53396 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.45□□□□□ -1.7
ACLYP53396 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ACLYP53396 MT-TP-201ENST00000387461 68 ntBASIC4.45□□□□□ -1.7
ACLYP53396 SNORA3.3-201ENST00000408712 125 ntBASIC4.45□□□□□ -1.7
ACLYP53396 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 SYF2P2-201ENST00000417620 583 ntBASIC4.45□□□□□ -1.7
ACLYP53396 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.45□□□□□ -1.7
ACLYP53396 AC114814.2-201ENST00000419195 485 ntBASIC4.45□□□□□ -1.7
ACLYP53396 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.45□□□□□ -1.7
ACLYP53396 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.45□□□□□ -1.7
ACLYP53396 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.45□□□□□ -1.7
ACLYP53396 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.45□□□□□ -1.7
ACLYP53396 YPEL5P3-201ENST00000547227 352 ntBASIC4.45□□□□□ -1.7
ACLYP53396 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 AC012417.1-201ENST00000582307 1039 ntBASIC4.45□□□□□ -1.7
ACLYP53396 AC034236.3-201ENST00000605999 461 ntBASIC4.45□□□□□ -1.7
ACLYP53396 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.45□□□□□ -1.7
ACLYP53396 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.45□□□□□ -1.7
ACLYP53396 AL590410.1-201ENST00000617925 333 ntBASIC4.45□□□□□ -1.7
ACLYP53396 AC015967.1-201ENST00000619893 476 ntBASIC4.45□□□□□ -1.7
ACLYP53396 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
ACLYP53396 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACLYP53396 LINC00561-201ENST00000565815 2738 ntBASIC4.44□□□□□ -1.7
ACLYP53396 MAPK10-372ENST00000641954 3413 ntBASIC4.44□□□□□ -1.7
ACLYP53396 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
ACLYP53396 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACLYP53396 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.44□□□□□ -1.7
ACLYP53396 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ACLYP53396 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.44□□□□□ -1.7
ACLYP53396 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
ACLYP53396 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
ACLYP53396 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACLYP53396 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACLYP53396 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms