Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.42□□□□□ -1.54
MSH6P52701 AL137843.1-201ENST00000605078 385 ntBASIC5.42□□□□□ -1.54
MSH6P52701 OR7M1P-201ENST00000608946 533 ntBASIC5.42□□□□□ -1.54
MSH6P52701 MIR8058-201ENST00000615737 89 ntBASIC5.42□□□□□ -1.54
MSH6P52701 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.42□□□□□ -1.54
MSH6P52701 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
MSH6P52701 ZNF962P-201ENST00000443465 3140 ntBASIC5.42□□□□□ -1.54
MSH6P52701 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.42□□□□□ -1.54
MSH6P52701 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 RN7SKP199-201ENST00000410325 305 ntBASIC5.42□□□□□ -1.54
MSH6P52701 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.42□□□□□ -1.54
MSH6P52701 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.42□□□□□ -1.54
MSH6P52701 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 AL591363.1-201ENST00000450091 483 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.42□□□□□ -1.54
MSH6P52701 SETP14-201ENST00000497538 873 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC021146.3-201ENST00000511911 260 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.42□□□□□ -1.54
MSH6P52701 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.42□□□□□ -1.54
MSH6P52701 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.42□□□□□ -1.54
MSH6P52701 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.42□□□□□ -1.54
MSH6P52701 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
MSH6P52701 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.41□□□□□ -1.54
MSH6P52701 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
MSH6P52701 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.41□□□□□ -1.54
MSH6P52701 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
MSH6P52701 NACAP7-201ENST00000407371 609 ntBASIC5.41□□□□□ -1.54
MSH6P52701 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.41□□□□□ -1.54
MSH6P52701 PRELID3BP10-201ENST00000431957 584 ntBASIC5.41□□□□□ -1.54
MSH6P52701 AC006994.1-201ENST00000438212 839 ntBASIC5.41□□□□□ -1.54
MSH6P52701 RAD23BP3-201ENST00000454157 1152 ntBASIC5.41□□□□□ -1.54
MSH6P52701 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.41□□□□□ -1.54
MSH6P52701 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.41□□□□□ -1.54
MSH6P52701 FTH1P9-201ENST00000513251 355 ntBASIC5.41□□□□□ -1.54
MSH6P52701 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.41□□□□□ -1.54
MSH6P52701 PHBP17-201ENST00000528576 541 ntBASIC5.41□□□□□ -1.54
MSH6P52701 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.41□□□□□ -1.54
MSH6P52701 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.41□□□□□ -1.54
MSH6P52701 AC064801.1-201ENST00000612025 407 ntBASIC5.41□□□□□ -1.54
MSH6P52701 AL589935.2-201ENST00000616471 1231 ntBASIC5.41□□□□□ -1.54
MSH6P52701 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH6P52701 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
MSH6P52701 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MSH6P52701 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MSH6P52701 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.4□□□□□ -1.54
MSH6P52701 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MSH6P52701 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.4□□□□□ -1.54
MSH6P52701 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
MSH6P52701 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
MSH6P52701 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSH6P52701 RNU6-673P-201ENST00000365084 104 ntBASIC5.4□□□□□ -1.55
MSH6P52701 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.4□□□□□ -1.55
MSH6P52701 AC092447.2-201ENST00000435487 669 ntBASIC5.4□□□□□ -1.55
MSH6P52701 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.4□□□□□ -1.55
MSH6P52701 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.4□□□□□ -1.55
MSH6P52701 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.4□□□□□ -1.55
MSH6P52701 AC022795.1-201ENST00000473808 480 ntBASIC5.4□□□□□ -1.55
MSH6P52701 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.4□□□□□ -1.55
MSH6P52701 SNORA70.17-201ENST00000516449 133 ntBASIC5.4□□□□□ -1.55
MSH6P52701 AC008694.2-201ENST00000517591 306 ntBASIC5.4□□□□□ -1.55
MSH6P52701 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.4□□□□□ -1.55
MSH6P52701 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.4□□□□□ -1.55
MSH6P52701 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.4□□□□□ -1.55
MSH6P52701 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.4□□□□□ -1.55
MSH6P52701 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSH6P52701 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.39□□□□□ -1.55
MSH6P52701 RNA5SP50-201ENST00000363731 107 ntBASIC5.39□□□□□ -1.55
MSH6P52701 AC010740.1-201ENST00000417035 684 ntBASIC5.39□□□□□ -1.55
MSH6P52701 MTND6P5-201ENST00000448266 512 ntBASIC5.39□□□□□ -1.55
MSH6P52701 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.39□□□□□ -1.55
MSH6P52701 PSMC1P13-201ENST00000458195 985 ntBASIC5.39□□□□□ -1.55
MSH6P52701 RN7SL807P-201ENST00000470923 297 ntBASIC5.39□□□□□ -1.55
MSH6P52701 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.39□□□□□ -1.55
MSH6P52701 RN7SKP83-201ENST00000516512 178 ntBASIC5.39□□□□□ -1.55
MSH6P52701 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.39□□□□□ -1.55
MSH6P52701 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.39□□□□□ -1.55
MSH6P52701 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.39□□□□□ -1.55
MSH6P52701 MTND1P6-201ENST00000523621 946 ntBASIC5.39□□□□□ -1.55
MSH6P52701 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.39□□□□□ -1.55
MSH6P52701 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.39□□□□□ -1.55
MSH6P52701 AC020914.6-201ENST00000594327 272 ntBASIC5.39□□□□□ -1.55
MSH6P52701 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSH6P52701 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSH6P52701 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms