Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC091167.4-201ENST00000605079 184 ntBASIC4.71□□□□□ -1.66
NEDD4P46934 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.7□□□□□ -1.66
NEDD4P46934 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
NEDD4P46934 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NEDD4P46934 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD4P46934 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD4P46934 SNORD51.1-201ENST00000365405 77 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 OR6K3-202ENST00000368146 996 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 RN7SKP263-201ENST00000411194 309 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD4P46934 BTF3P9-201ENST00000418784 283 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD4P46934 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD4P46934 AL390879.2-203ENST00000426943 1121 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 RPL17P35-201ENST00000432217 549 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AC007563.3-201ENST00000433233 371 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD4P46934 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD4P46934 AC074367.1-201ENST00000438685 1125 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AC083863.1-201ENST00000438811 231 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 MTND2P25-201ENST00000449028 610 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD4P46934 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD4P46934 AL049829.1-201ENST00000465411 156 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 VN1R105P-201ENST00000486595 910 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AC110792.1-201ENST00000491826 472 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD4P46934 RNU6-352P-201ENST00000516908 107 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 RNA5SP179-201ENST00000517284 121 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 NDUFA5P2-201ENST00000519723 344 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.7□□□□□ -1.66
NEDD4P46934 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD4P46934 MTND4LP25-201ENST00000570218 163 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 AC120057.2-201ENST00000571520 271 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD4P46934 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.7□□□□□ -1.66
NEDD4P46934 AP004372.1-201ENST00000604842 844 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 MIR6875-201ENST00000617506 72 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD4P46934 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
NEDD4P46934 AC019080.5-201ENST00000624891 757 ntBASIC4.7□□□□□ -1.66
NEDD4P46934 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD4P46934 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NEDD4P46934 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD4P46934 AC022893.2-201ENST00000564832 3296 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD4P46934 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD4P46934 CDC27P2-201ENST00000425026 1922 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AC017002.4-201ENST00000604721 1525 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 Y_RNA.110-201ENST00000363220 99 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
NEDD4P46934 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
NEDD4P46934 AL450992.3-201ENST00000413192 568 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD4P46934 AC073464.3-201ENST00000422564 712 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 OR8F1P-201ENST00000425243 930 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD4P46934 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD4P46934 AC245517.2-201ENST00000442890 346 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.69□□□□□ -1.66
NEDD4P46934 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEDD4P46934 TOMM20P2-201ENST00000540082 421 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.69□□□□□ -1.66
NEDD4P46934 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.69□□□□□ -1.66
NEDD4P46934 SNORD39.2-201ENST00000579995 76 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 OR1AB1P-201ENST00000585564 761 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD4P46934 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD4P46934 VN1R85P-201ENST00000601587 426 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 BMS1P7-201ENST00000602440 1052 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AC005021.1-201ENST00000608730 355 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 AC124312.6-202ENST00000623624 418 ntBASIC4.69□□□□□ -1.66
NEDD4P46934 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD4P46934 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD4P46934 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 AC018555.1-201ENST00000567548 1980 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NEDD4P46934 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NEDD4P46934 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 AC027290.2-201ENST00000623210 18662 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.68□□□□□ -1.66
NEDD4P46934 SNORD115-48-201ENST00000364764 76 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD4P46934 SNORA3C-201ENST00000408792 125 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AC234781.4-201ENST00000419384 244 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD4P46934 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 TPTE2P3-201ENST00000441562 1189 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 VN1R25P-201ENST00000443385 738 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AL627224.1-201ENST00000448334 444 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 VN1R40P-201ENST00000455196 941 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 MTND3P24-201ENST00000506306 329 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AC026402.1-201ENST00000513642 170 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD4P46934 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.68□□□□□ -1.66
NEDD4P46934 AC022882.1-201ENST00000532142 501 ntBASIC4.68□□□□□ -1.66
NEDD4P46934 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms