Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL355852.1-201ENST00000454081 1771 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN9P43378 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN9P43378 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN9P43378 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN9P43378 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN9P43378 Z98745.1-201ENST00000402553 494 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 RPS24P7-201ENST00000416921 246 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC048351.1-201ENST00000420064 602 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 RPF2P1-201ENST00000424137 906 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN9P43378 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 MTND1P26-201ENST00000440488 538 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AL591719.1-201ENST00000444669 744 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC005002.1-201ENST00000447458 540 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC004022.1-201ENST00000447766 1066 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN9P43378 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 BX248409.1-201ENST00000455497 255 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 SCARNA10-201ENST00000459255 330 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC006967.1-201ENST00000467608 589 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 RPL23AP44-201ENST00000482216 473 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 MTND4LP2-201ENST00000502312 285 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC010627.1-201ENST00000503819 1294 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 MTND4P33-201ENST00000556706 766 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN9P43378 MIR4666A-201ENST00000580160 79 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC124856.1-201ENST00000600819 896 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC024940.4-201ENST00000605507 246 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC079395.3-201ENST00000615161 484 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC023509.5-201ENST00000617434 807 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AL121890.2-201ENST00000617644 465 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN9P43378 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN9P43378 AC016717.3-201ENST00000624730 554 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN9P43378 U3.53-201ENST00000628922 216 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN9P43378 AC017104.5-201ENST00000637647 639 ntBASIC4.84□□□□□ -1.63
PTPN9P43378 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN9P43378 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN9P43378 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.64
PTPN9P43378 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.84□□□□□ -1.64
PTPN9P43378 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.84□□□□□ -1.64
PTPN9P43378 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 AC104118.1-201ENST00000607625 1589 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN9P43378 KARSP3-201ENST00000571212 1504 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
PTPN9P43378 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 RN7SKP115-201ENST00000363177 317 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 MIR513B-201ENST00000385136 84 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTPN9P43378 OR2X1P-201ENST00000421144 687 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 C1DP1-201ENST00000426049 402 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 USP9YP9-201ENST00000429406 715 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 CETN4P-201ENST00000432407 469 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 CBX1P4-201ENST00000439415 457 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 EEF1A1P39-201ENST00000440791 250 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 DNAJC19P8-201ENST00000452887 259 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 ISCUP1-201ENST00000454451 448 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 NAP1L1P3-201ENST00000462291 880 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AC022795.1-201ENST00000473808 480 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 IGLV2-34-201ENST00000490007 283 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN9P43378 AL035404.1-201ENST00000497982 568 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 AC010285.3-201ENST00000511668 676 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AC007016.1-201ENST00000512110 244 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN9P43378 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 OR5M2P-201ENST00000529003 936 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN9P43378 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN9P43378 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN9P43378 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN9P43378 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN9P43378 RN7SL690P-201ENST00000582087 240 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 MIR4480-201ENST00000582492 71 ntBASIC4.83□□□□□ -1.64
PTPN9P43378 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN9P43378 AP001542.2-201ENST00000593141 364 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms