Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC006133.1-201ENST00000617106 264 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF9P41273 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TNFSF9P41273 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TNFSF9P41273 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF9P41273 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TNFSF9P41273 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFSF9P41273 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFSF9P41273 RNU6-178P-201ENST00000384631 104 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 RNA5SP306-201ENST00000411087 107 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 CYCSP19-201ENST00000411715 316 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 ELOCP18-201ENST00000434209 337 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 AC093716.1-201ENST00000435923 377 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 RPL7L1P1-201ENST00000448259 785 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 RPS17P13-201ENST00000448974 407 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.23□□□□□ -1.73
TNFSF9P41273 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TNFSF9P41273 SNORA67.7-201ENST00000516664 135 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 SCARNA14-201ENST00000516903 136 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.23□□□□□ -1.73
TNFSF9P41273 NPM1P47-201ENST00000560843 856 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFSF9P41273 AC138473.1-201ENST00000605717 526 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 AL133370.2-201ENST00000619934 439 ntBASIC4.23□□□□□ -1.73
TNFSF9P41273 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFSF9P41273 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
TNFSF9P41273 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF9P41273 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFSF9P41273 MT-TP-201ENST00000387461 68 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 AC093719.1-202ENST00000392735 373 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 TCEA1P4-201ENST00000415066 844 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF9P41273 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.22□□□□□ -1.73
TNFSF9P41273 AC011742.1-201ENST00000431448 434 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 MTND6P18-201ENST00000439477 513 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 AC091959.2-201ENST00000477363 321 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 HAUS1P1-201ENST00000505275 832 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFSF9P41273 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFSF9P41273 MIR3158-1-201ENST00000583596 81 ntBASIC4.22□□□□□ -1.73
TNFSF9P41273 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF9P41273 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF9P41273 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF9P41273 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TNFSF9P41273 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.21□□□□□ -1.73
TNFSF9P41273 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.73
TNFSF9P41273 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFSF9P41273 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
TNFSF9P41273 AC110792.3-201ENST00000595906 1614 ntBASIC4.21□□□□□ -1.73
TNFSF9P41273 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF9P41273 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF9P41273 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
TNFSF9P41273 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF9P41273 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFSF9P41273 RNU6-386P-201ENST00000362650 107 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 RNA5SP97-201ENST00000365006 84 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 U1.1-201ENST00000384101 164 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 MIR670-201ENST00000390142 98 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 AL034374.1-201ENST00000406329 351 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 RN7SKP159-201ENST00000410657 292 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF9P41273 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFSF9P41273 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF9P41273 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFSF9P41273 OR4F13P-201ENST00000428478 931 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 HMGB3P5-201ENST00000428894 612 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 ARL4AP4-201ENST00000434170 518 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 CACYBPP1-201ENST00000438592 684 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF9P41273 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.21□□□□□ -1.74
TNFSF9P41273 MTCO3P42-201ENST00000509488 518 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF9P41273 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF9P41273 MTCO3P39-201ENST00000514812 518 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFSF9P41273 OR4A12P-201ENST00000530847 918 ntBASIC4.21□□□□□ -1.74
TNFSF9P41273 NPM1P35-201ENST00000533043 868 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms