Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS2P33552 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CKS2P33552 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CKS2P33552 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
CKS2P33552 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CKS2P33552 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CKS2P33552 RNA5SP443-201ENST00000363083 132 ntBASIC2.79□□□□□ -1.96
CKS2P33552 RNA5SP399-201ENST00000364003 117 ntBASIC2.79□□□□□ -1.96
CKS2P33552 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 RPS12P23-201ENST00000419579 400 ntBASIC2.79□□□□□ -1.96
CKS2P33552 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS2P33552 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 AL138878.2-201ENST00000440581 1241 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AL353093.1-201ENST00000441292 436 ntBASIC2.79□□□□□ -1.96
CKS2P33552 RPL36AP15-201ENST00000444514 266 ntBASIC2.79□□□□□ -1.96
CKS2P33552 OR52Y1P-201ENST00000452418 828 ntBASIC2.79□□□□□ -1.96
CKS2P33552 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 AC006539.3-201ENST00000454258 129 ntBASIC2.79□□□□□ -1.96
CKS2P33552 HMGN2P7-201ENST00000456186 273 ntBASIC2.79□□□□□ -1.96
CKS2P33552 RPL21P11-201ENST00000461458 483 ntBASIC2.79□□□□□ -1.96
CKS2P33552 SEPT7P6-201ENST00000469999 1143 ntBASIC2.79□□□□□ -1.96
CKS2P33552 RN7SL604P-201ENST00000492589 296 ntBASIC2.79□□□□□ -1.96
CKS2P33552 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS2P33552 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 AC008489.1-201ENST00000524271 483 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.79□□□□□ -1.96
CKS2P33552 OR5AP1P-201ENST00000529730 940 ntBASIC2.79□□□□□ -1.96
CKS2P33552 BRD9P1-201ENST00000529855 560 ntBASIC2.79□□□□□ -1.96
CKS2P33552 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 MIR4458-201ENST00000578872 75 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS2P33552 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.79□□□□□ -1.96
CKS2P33552 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 KLKP1-201ENST00000595979 403 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.79□□□□□ -1.96
CKS2P33552 AC015849.6-201ENST00000605454 474 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AC103710.3-201ENST00000608157 948 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AL096803.3-201ENST00000609032 532 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AC008121.2-201ENST00000614647 523 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AL391261.4-201ENST00000616012 481 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AC016957.2-201ENST00000616998 848 ntBASIC2.79□□□□□ -1.96
CKS2P33552 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC2.79□□□□□ -1.96
CKS2P33552 C2orf27A-204ENST00000623058 969 ntBASIC2.79□□□□□ -1.96
CKS2P33552 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CKS2P33552 AC110792.3-201ENST00000595906 1614 ntBASIC2.79□□□□□ -1.96
CKS2P33552 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.78□□□□□ -1.96
CKS2P33552 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.78□□□□□ -1.96
CKS2P33552 RNU6-304P-201ENST00000364855 107 ntBASIC2.78□□□□□ -1.96
CKS2P33552 MIR92A2-201ENST00000385299 75 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.78□□□□□ -1.96
CKS2P33552 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC2.78□□□□□ -1.96
CKS2P33552 AC006989.1-201ENST00000427212 131 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AL158071.1-201ENST00000430315 461 ntBASIC2.78□□□□□ -1.96
CKS2P33552 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 TXNP1-201ENST00000441872 371 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.78□□□□□ -1.96
CKS2P33552 AC009963.2-201ENST00000453431 138 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AL136097.1-201ENST00000456945 913 ntBASIC2.78□□□□□ -1.96
CKS2P33552 MTND2P28-201ENST00000457540 1044 ntBASIC2.78□□□□□ -1.96
CKS2P33552 RPL9P32-201ENST00000464118 620 ntBASIC2.78□□□□□ -1.96
CKS2P33552 RPL7L1P8-201ENST00000469911 741 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AC084198.1-201ENST00000477747 402 ntBASIC2.78□□□□□ -1.96
CKS2P33552 NPM1P17-201ENST00000479221 602 ntBASIC2.78□□□□□ -1.96
CKS2P33552 RPS4XP22-201ENST00000480755 780 ntBASIC2.78□□□□□ -1.96
CKS2P33552 RPS3AP50-201ENST00000487064 803 ntBASIC2.78□□□□□ -1.96
CKS2P33552 RPL23AP73-201ENST00000492507 471 ntBASIC2.78□□□□□ -1.96
CKS2P33552 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.78□□□□□ -1.96
CKS2P33552 AC010476.1-201ENST00000519111 851 ntBASIC2.78□□□□□ -1.96
CKS2P33552 IGKV3D-34-201ENST00000522638 302 ntBASIC2.78□□□□□ -1.96
CKS2P33552 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 OR4C2P-201ENST00000530855 1064 ntBASIC2.78□□□□□ -1.96
CKS2P33552 CYCSP29-201ENST00000533731 318 ntBASIC2.78□□□□□ -1.96
CKS2P33552 TRAV8-5-201ENST00000537369 341 ntBASIC2.78□□□□□ -1.96
CKS2P33552 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.78□□□□□ -1.96
CKS2P33552 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.78□□□□□ -1.96
CKS2P33552 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.78□□□□□ -1.96
CKS2P33552 AC106785.3-201ENST00000564064 847 ntBASIC2.78□□□□□ -1.96
CKS2P33552 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.78□□□□□ -1.96
CKS2P33552 MIR4270-201ENST00000581799 70 ntBASIC2.78□□□□□ -1.96
CKS2P33552 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.78□□□□□ -1.96
CKS2P33552 MIR4512-201ENST00000583257 77 ntBASIC2.78□□□□□ -1.96
CKS2P33552 PSMA6P4-201ENST00000603247 718 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms