Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
EPHA3P29320 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 RNU6-1066P-201ENST00000363573 105 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 RNA5SP510-201ENST00000364697 99 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 RNU6-304P-201ENST00000364855 107 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 TMSB4XP8-201ENST00000402089 135 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 MIR1182-201ENST00000408363 97 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AL390774.1-201ENST00000411924 246 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 TMSB4XP6-201ENST00000415187 135 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 AL133325.1-201ENST00000421090 382 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 TMSB4XP1-201ENST00000424567 135 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 SKP1P3-201ENST00000429280 487 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AL589823.1-201ENST00000429577 183 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 FTLP19-201ENST00000433300 394 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 MTCO2P16-201ENST00000436962 677 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 RAB11AP1-201ENST00000442978 646 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 AL034418.1-201ENST00000448675 860 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHA3P29320 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 HIGD1AP6-201ENST00000521833 279 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AC112191.2-201ENST00000522428 333 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
EPHA3P29320 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 AC008521.2-201ENST00000591021 259 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHA3P29320 RPSAP73-201ENST00000614820 330 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHA3P29320 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.89□□□□□ -1.63
EPHA3P29320 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHA3P29320 FP325313.1-201ENST00000638228 703 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 AC083843.3-201ENST00000623679 2186 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.89□□□□□ -1.63
EPHA3P29320 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA3P29320 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
EPHA3P29320 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA3P29320 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA3P29320 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHA3P29320 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHA3P29320 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA3P29320 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA3P29320 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHA3P29320 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
EPHA3P29320 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
EPHA3P29320 AL512646.1-201ENST00000269395 1077 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 RN7SKP113-201ENST00000363891 295 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 Y_RNA.201-201ENST00000364052 96 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 RN7SKP124-201ENST00000364730 341 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 RNU6-621P-201ENST00000364752 109 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA3P29320 RNA5SP284-201ENST00000384547 118 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 SNORD116-23-201ENST00000384645 92 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
EPHA3P29320 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA3P29320 AL139098.1-201ENST00000407291 389 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA3P29320 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHA3P29320 TIMM9P2-201ENST00000419324 266 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA3P29320 RPP40P1-201ENST00000426762 456 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA3P29320 BX323845.1-201ENST00000432417 179 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AC008072.1-201ENST00000434254 824 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 CYCSP6-201ENST00000434498 302 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AL450023.3-201ENST00000440592 271 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHA3P29320 AC009961.3-201ENST00000449832 765 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 RPL37P3-201ENST00000456825 293 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AL133445.1-201ENST00000467051 452 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AC010307.1-201ENST00000467206 836 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHA3P29320 AC007998.1-201ENST00000474156 672 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 RPL30P6-201ENST00000475925 342 ntBASIC4.88□□□□□ -1.63
EPHA3P29320 AC092045.1-201ENST00000495716 1231 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms