Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NFKB1P19838 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 HDAC1P2-201ENST00000453661 1398 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 RN7SKP237-201ENST00000364663 301 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 SNORA32.2-201ENST00000384049 122 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 RNU6-43P-201ENST00000384302 107 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AL133260.1-201ENST00000405720 405 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 RNU2-62P-201ENST00000410868 191 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.36□□□□□ -1.39
NFKB1P19838 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.36□□□□□ -1.39
NFKB1P19838 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NFKB1P19838 MRPS21P3-201ENST00000436696 262 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 HMGB1P18-201ENST00000438801 619 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 MORF4-201ENST00000447135 971 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 Y_RNA.631-201ENST00000459607 101 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC090142.1-201ENST00000465776 462 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 RPL7P39-201ENST00000481157 744 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 GAPDHP56-201ENST00000506031 988 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 OR4D12P-201ENST00000509361 911 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 MRPS5P3-201ENST00000515577 166 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 Y_RNA.711-201ENST00000516993 102 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 RN7SKP283-201ENST00000517197 270 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.36□□□□□ -1.39
NFKB1P19838 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 OR5M2P-201ENST00000529003 936 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.36□□□□□ -1.39
NFKB1P19838 AC099489.2-201ENST00000574976 260 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 MIR4742-201ENST00000581069 85 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC010525.2-201ENST00000590920 195 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.36□□□□□ -1.39
NFKB1P19838 AC011468.4-201ENST00000603942 409 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC021646.1-201ENST00000605469 484 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC093913.1-201ENST00000614178 329 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.36□□□□□ -1.39
NFKB1P19838 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 AC096921.2-201ENST00000561507 1916 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NFKB1P19838 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NFKB1P19838 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NFKB1P19838 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 MTND4P35-201ENST00000604257 1375 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NFKB1P19838 AL360271.1-201ENST00000395679 510 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 MTND4LP17-201ENST00000414607 293 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC007562.1-201ENST00000421819 517 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 ATP5JP1-201ENST00000431631 322 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 RPS3AP54-201ENST00000435535 734 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC006335.2-201ENST00000437993 330 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AL356121.1-201ENST00000442911 156 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AL133351.3-201ENST00000454998 193 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC019084.1-201ENST00000457337 432 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 RN7SL326P-201ENST00000477493 296 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC090096.1-201ENST00000489168 390 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC021146.2-201ENST00000504736 556 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 RNU6-1046P-201ENST00000516538 107 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 RPA2P3-201ENST00000533268 770 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.35□□□□□ -1.39
NFKB1P19838 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.35□□□□□ -1.39
NFKB1P19838 NPIPB1P-202ENST00000588786 828 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC010591.1-201ENST00000603941 649 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms