Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC3P19447 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC3P19447 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC3P19447 AC091489.2-201ENST00000566263 604 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC3P19447 AL159169.3-201ENST00000608871 561 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AL359535.1-201ENST00000612100 1087 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC078899.5-201ENST00000612475 178 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 AC123768.4-201ENST00000616244 701 ntBASIC6.65□□□□□ -1.34
ERCC3P19447 CASC19-248ENST00000641674 1356 ntBASIC6.65□□□□□ -1.35
ERCC3P19447 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.65□□□□□ -1.35
ERCC3P19447 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
ERCC3P19447 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
ERCC3P19447 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.65□□□□□ -1.35
ERCC3P19447 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 SPTLC1P2-201ENST00000407089 121 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC069218.2-201ENST00000411665 344 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC3P19447 RPL21P108-201ENST00000413857 481 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 UBE2V1P10-201ENST00000414685 269 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 RPS26P47-201ENST00000427219 348 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC3P19447 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 RPL12P18-201ENST00000437175 325 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ERCC3P19447 RPS26P56-201ENST00000444468 240 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC3P19447 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC3P19447 AL596266.1-201ENST00000448132 400 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 TPT1P7-201ENST00000458300 517 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 RN7SL547P-201ENST00000490793 290 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC021678.1-201ENST00000505195 936 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC010460.1-201ENST00000507087 466 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC3P19447 AL671862.1-201ENST00000515851 349 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 MTND1P5-201ENST00000517906 940 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC139365.2-201ENST00000517972 253 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AP004247.1-201ENST00000531556 1289 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC3P19447 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC3P19447 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 MTATP6P3-201ENST00000581686 676 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 FKBP1AP1-201ENST00000594588 318 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC063977.5-201ENST00000601044 974 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC015871.2-201ENST00000603605 948 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC097468.3-201ENST00000607956 456 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 AC068722.2-201ENST00000618734 544 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 DCAF13P1-201ENST00000495256 1330 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC3P19447 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 SOCS5P3-201ENST00000425115 1576 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ERCC3P19447 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 C4BPAP1-201ENST00000415474 1893 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 AC133552.1-201ENST00000569988 4007 ntBASIC6.64□□□□□ -1.35
ERCC3P19447 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC3P19447 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC3P19447 AC011933.2-201ENST00000578539 2790 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 AP005435.3-201ENST00000531260 3198 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 RNU5E-5P-201ENST00000365379 116 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC3P19447 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
ERCC3P19447 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 AL512430.2-201ENST00000406786 339 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms