Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MTCO1P31-201ENST00000506355 492 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC108475.1-201ENST00000507880 950 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.2□□□□□ -1.74
XRCC1P18887 AL592156.1-201ENST00000508758 304 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 VWA8P1-201ENST00000510889 176 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 KCTD9P2-201ENST00000512203 1013 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 RNA5SP49-201ENST00000516450 115 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 RNU6-1004P-201ENST00000516584 111 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC090819.1-201ENST00000523800 1111 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.2□□□□□ -1.74
XRCC1P18887 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 AL352979.3-201ENST00000553515 247 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC025884.1-201ENST00000556034 378 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC005242.1-201ENST00000585658 438 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AL354984.3-201ENST00000604803 325 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC012020.1-201ENST00000624541 1728 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC018555.1-201ENST00000567548 1980 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.19□□□□□ -1.74
XRCC1P18887 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 RAD1P1-201ENST00000231383 813 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
XRCC1P18887 RNU1-14P-201ENST00000362759 152 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 RNA5SP513-201ENST00000364648 118 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 RPS26P8-201ENST00000393490 348 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 RN7SKP235-201ENST00000410662 305 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 MTND2P11-201ENST00000423638 648 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 DPY19L1P2-201ENST00000426647 915 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC092017.2-201ENST00000427600 362 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC004975.1-201ENST00000428733 208 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 YWHAEP5-201ENST00000431545 765 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 CEACAMP1-201ENST00000434624 1035 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 GSTA7P-201ENST00000438425 448 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.19□□□□□ -1.74
XRCC1P18887 AL500527.1-201ENST00000448532 255 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.19□□□□□ -1.74
XRCC1P18887 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.19□□□□□ -1.74
XRCC1P18887 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.19□□□□□ -1.74
XRCC1P18887 SNORA31.9-201ENST00000516429 84 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 VTA1P2-201ENST00000520205 911 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 MRPL49P2-201ENST00000521066 465 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 AC068446.3-201ENST00000555285 382 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.19□□□□□ -1.74
XRCC1P18887 AC020910.2-201ENST00000603635 610 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC012557.1-201ENST00000607115 611 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC090948.2-201ENST00000607363 564 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AC023043.4-201ENST00000612081 449 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.19□□□□□ -1.74
XRCC1P18887 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 MIR8059-201ENST00000620427 81 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 MIR4727-201ENST00000622232 55 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 AL356490.1-201ENST00000623079 479 ntBASIC4.19□□□□□ -1.74
XRCC1P18887 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
XRCC1P18887 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
XRCC1P18887 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
XRCC1P18887 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
XRCC1P18887 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 MTND4P21-201ENST00000453886 1357 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
XRCC1P18887 Z73965.1-201ENST00000623412 2297 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 RNU6-304P-201ENST00000364855 107 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AL161909.1-201ENST00000397390 712 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 RPS27AP11-201ENST00000402798 447 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 JKAMPP1-201ENST00000413804 919 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 MFSD13B-201ENST00000420133 1290 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC099336.2-201ENST00000422457 254 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 MTND4P24-201ENST00000424002 397 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 FAR1P1-201ENST00000427163 934 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 MTND4LP7-201ENST00000431728 294 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms