Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 AL031985.3-201ENST00000565390 2449 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 CASC19-204ENST00000641001 2055 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AC097461.1-201ENST00000568928 2821 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 RNA5SP30-201ENST00000365552 115 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL6A2P12110 BTF3P7-201ENST00000407097 488 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 RNA5SP431-201ENST00000410312 120 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 IPMKP1-201ENST00000425988 855 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 DYNLL1P7-201ENST00000429273 258 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 MTND1P2-201ENST00000430604 821 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 AL031663.1-201ENST00000437445 219 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC122718.1-201ENST00000439448 744 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC016724.1-201ENST00000453215 421 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 AL359385.1-201ENST00000456509 365 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 FAM133DP-201ENST00000464802 691 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 LSM3P4-201ENST00000502948 309 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AC105252.1-201ENST00000503089 286 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 DEFB108A-201ENST00000530110 222 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL6A2P12110 AP002453.2-201ENST00000533503 320 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.56□□□□□ -1.52
COL6A2P12110 MIR548S-201ENST00000581352 82 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.56□□□□□ -1.52
COL6A2P12110 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 AC119501.1-201ENST00000603646 475 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 MIR6861-201ENST00000618657 64 ntBASIC5.56□□□□□ -1.52
COL6A2P12110 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL6A2P12110 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL6A2P12110 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.56□□□□□ -1.52
COL6A2P12110 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 ABCC13-202ENST00000463099 3842 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.55□□□□□ -1.52
COL6A2P12110 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 PWAR1-201ENST00000624188 2414 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
COL6A2P12110 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 COX6B1P3-201ENST00000312310 260 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 GAPDHP24-201ENST00000328713 983 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 RNU5F-6P-201ENST00000362979 116 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL6A2P12110 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL6A2P12110 RNU2-65P-201ENST00000410162 185 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC073264.1-201ENST00000411508 416 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 RBMY2KP-201ENST00000418221 992 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 RPS27AP14-201ENST00000422868 454 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 DPPA2P1-201ENST00000428060 556 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
COL6A2P12110 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 RAB11AP1-201ENST00000442978 646 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 RPL7P31-201ENST00000450192 724 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 HMGB1P4-201ENST00000455362 567 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC027673.1-201ENST00000456245 405 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 RPL7AP52-201ENST00000458096 790 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms