Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL158042.1-201ENST00000605338 460 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 RPL23AP61-201ENST00000623642 466 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 AC083837.1-201ENST00000565297 2994 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AP000756.2-201ENST00000624168 2567 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 DHX9P1-201ENST00000436565 3076 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC073136.1-201ENST00000449426 2884 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 ANKRD36P1-201ENST00000344424 659 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RNU1-130P-201ENST00000363930 160 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 FCF1P5-201ENST00000406490 482 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RN7SKP182-201ENST00000410772 298 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 GTF2IP2-201ENST00000424290 697 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 RPS12P10-201ENST00000427031 377 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 HIGD1AP12-201ENST00000427832 281 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.82□□□□□ -1.48
SNRPA1P09661 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 MRPL48P1-201ENST00000445390 636 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.82□□□□□ -1.48
SNRPA1P09661 OR51B8P-201ENST00000449892 769 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RPL7P32-201ENST00000457119 744 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RN7SL98P-201ENST00000462271 300 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC053481.1-201ENST00000467217 306 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 RN7SL41P-201ENST00000476144 297 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 MTND1P22-201ENST00000510572 951 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RN7SKP34-201ENST00000516142 244 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AP000926.4-201ENST00000527351 454 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 OR8A2P-201ENST00000528631 952 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC068020.1-201ENST00000594215 661 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AC130352.1-201ENST00000602979 661 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL360219.1-201ENST00000610230 366 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL138478.1-201ENST00000612252 832 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AC024257.5-201ENST00000612739 531 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 AL158062.1-201ENST00000619632 745 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SNRPA1P09661 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SNRPA1P09661 CPHL1P-201ENST00000461341 3407 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.82□□□□□ -1.48
SNRPA1P09661 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNRPA1P09661 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SNRPA1P09661 AL731566.1-201ENST00000620490 1937 ntBASIC5.82□□□□□ -1.48
SNRPA1P09661 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 AC017007.4-201ENST00000503353 1352 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SNRPA1P09661 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SNRPA1P09661 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 RNU4-51P-201ENST00000364206 140 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL356131.1-201ENST00000405826 414 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL080315.1-201ENST00000406055 466 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.81□□□□□ -1.48
SNRPA1P09661 C1DP1-201ENST00000426049 402 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.81□□□□□ -1.48
SNRPA1P09661 VDAC1P6-201ENST00000430062 855 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 ETF1P3-201ENST00000430422 1160 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL365396.1-201ENST00000430854 671 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.81□□□□□ -1.48
SNRPA1P09661 AL035458.1-201ENST00000433096 585 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC011998.1-201ENST00000433403 117 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL008629.1-201ENST00000438615 184 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC023512.1-201ENST00000444513 499 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms