Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 VN1R105P-201ENST00000486595 910 ntBASIC4.56□□□□□ -1.68
VTNP04004 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.56□□□□□ -1.68
VTNP04004 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.56□□□□□ -1.68
VTNP04004 RN7SL703P-201ENST00000578485 302 ntBASIC4.56□□□□□ -1.68
VTNP04004 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 AL391834.1-201ENST00000609609 560 ntBASIC4.56□□□□□ -1.68
VTNP04004 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.56□□□□□ -1.68
VTNP04004 AC095038.2-201ENST00000621464 1070 ntBASIC4.56□□□□□ -1.68
VTNP04004 MAPK10-320ENST00000641462 6696 ntBASIC4.56□□□□□ -1.68
VTNP04004 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTNP04004 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTNP04004 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.55□□□□□ -1.68
VTNP04004 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.55□□□□□ -1.68
VTNP04004 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VTNP04004 RAD1P1-201ENST00000231383 813 ntBASIC4.55□□□□□ -1.68
VTNP04004 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 RN7SKP224-201ENST00000364140 325 ntBASIC4.55□□□□□ -1.68
VTNP04004 RNU6-609P-201ENST00000365459 107 ntBASIC4.55□□□□□ -1.68
VTNP04004 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VTNP04004 AL445189.1-201ENST00000405722 338 ntBASIC4.55□□□□□ -1.68
VTNP04004 AL034374.1-201ENST00000406329 351 ntBASIC4.55□□□□□ -1.68
VTNP04004 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.55□□□□□ -1.68
VTNP04004 HSPE1P12-201ENST00000412576 301 ntBASIC4.55□□□□□ -1.68
VTNP04004 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 MTND2P9-201ENST00000422293 931 ntBASIC4.55□□□□□ -1.68
VTNP04004 RBMY1KP-201ENST00000423480 476 ntBASIC4.55□□□□□ -1.68
VTNP04004 OR8F1P-201ENST00000425243 930 ntBASIC4.55□□□□□ -1.68
VTNP04004 RPL7P2-201ENST00000427639 268 ntBASIC4.55□□□□□ -1.68
VTNP04004 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
VTNP04004 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 AC022431.1-201ENST00000450941 438 ntBASIC4.55□□□□□ -1.68
VTNP04004 RPL23AP2-201ENST00000471227 466 ntBASIC4.55□□□□□ -1.68
VTNP04004 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 NPM1P29-201ENST00000483112 803 ntBASIC4.55□□□□□ -1.68
VTNP04004 BNIP3P41-201ENST00000503774 571 ntBASIC4.55□□□□□ -1.68
VTNP04004 MTND4LP31-201ENST00000514859 294 ntBASIC4.55□□□□□ -1.68
VTNP04004 RNU6-334P-201ENST00000517072 102 ntBASIC4.55□□□□□ -1.68
VTNP04004 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 UBTFL9-201ENST00000534504 1148 ntBASIC4.55□□□□□ -1.68
VTNP04004 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.55□□□□□ -1.68
VTNP04004 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.55□□□□□ -1.68
VTNP04004 DPRXP4-201ENST00000578053 568 ntBASIC4.55□□□□□ -1.68
VTNP04004 AC053481.4-201ENST00000583164 216 ntBASIC4.55□□□□□ -1.68
VTNP04004 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
VTNP04004 AC008759.1-201ENST00000589783 983 ntBASIC4.55□□□□□ -1.68
VTNP04004 SLC25A36P1-201ENST00000590111 465 ntBASIC4.55□□□□□ -1.68
VTNP04004 AC105148.1-201ENST00000604961 409 ntBASIC4.55□□□□□ -1.68
VTNP04004 AP000240.1-201ENST00000609910 452 ntBASIC4.55□□□□□ -1.68
VTNP04004 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 AC092435.4-201ENST00000623012 4159 ntBASIC4.55□□□□□ -1.68
VTNP04004 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
VTNP04004 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTNP04004 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
VTNP04004 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTNP04004 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTNP04004 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 CASC19-261ENST00000641853 1638 ntBASIC4.54□□□□□ -1.68
VTNP04004 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VTNP04004 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 AC067945.1-201ENST00000342609 618 ntBASIC4.54□□□□□ -1.68
VTNP04004 RNU6-792P-201ENST00000363490 107 ntBASIC4.54□□□□□ -1.68
VTNP04004 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTNP04004 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.54□□□□□ -1.68
VTNP04004 AL354692.1-201ENST00000423044 315 ntBASIC4.54□□□□□ -1.68
VTNP04004 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 NDUFA5P10-201ENST00000432147 357 ntBASIC4.54□□□□□ -1.68
VTNP04004 CACYBPP1-201ENST00000438592 684 ntBASIC4.54□□□□□ -1.68
VTNP04004 RPS4XP4-201ENST00000443195 763 ntBASIC4.54□□□□□ -1.68
VTNP04004 AL157827.1-201ENST00000447622 132 ntBASIC4.54□□□□□ -1.68
VTNP04004 HMGN1P5-201ENST00000448591 263 ntBASIC4.54□□□□□ -1.68
VTNP04004 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.54□□□□□ -1.68
VTNP04004 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.54□□□□□ -1.68
VTNP04004 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.54□□□□□ -1.68
VTNP04004 RPL38P1-201ENST00000460914 211 ntBASIC4.54□□□□□ -1.68
VTNP04004 AC010460.1-201ENST00000507087 466 ntBASIC4.54□□□□□ -1.68
VTNP04004 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
VTNP04004 KRT19P6-201ENST00000510983 209 ntBASIC4.54□□□□□ -1.68
VTNP04004 AC010374.2-201ENST00000512933 535 ntBASIC4.54□□□□□ -1.68
VTNP04004 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.54□□□□□ -1.68
VTNP04004 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTNP04004 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.54□□□□□ -1.68
VTNP04004 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTNP04004 SETP1-201ENST00000556014 845 ntBASIC4.54□□□□□ -1.68
VTNP04004 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.54□□□□□ -1.68
VTNP04004 SNORD91B-202ENST00000608459 222 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms