Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Z98745.1-201ENST00000402553 494 ntBASIC4.24□□□□□ -1.73
PRKNO60260 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.24□□□□□ -1.73
PRKNO60260 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 RPL7AP25-201ENST00000423357 805 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC010099.3-201ENST00000423896 409 ntBASIC4.24□□□□□ -1.73
PRKNO60260 HIGD1AP12-201ENST00000427832 281 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC068287.1-201ENST00000430283 295 ntBASIC4.24□□□□□ -1.73
PRKNO60260 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 NMNAT1P2-201ENST00000435192 860 ntBASIC4.24□□□□□ -1.73
PRKNO60260 RPL7P29-201ENST00000437151 728 ntBASIC4.24□□□□□ -1.73
PRKNO60260 EEF1A1P39-201ENST00000440791 250 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC104651.2-201ENST00000447549 528 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC004022.1-201ENST00000447766 1066 ntBASIC4.24□□□□□ -1.73
PRKNO60260 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKNO60260 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AL935212.3-201ENST00000450729 284 ntBASIC4.24□□□□□ -1.73
PRKNO60260 ISCUP1-201ENST00000454451 448 ntBASIC4.24□□□□□ -1.73
PRKNO60260 RNU7-27P-201ENST00000459281 62 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC005410.1-202ENST00000460347 485 ntBASIC4.24□□□□□ -1.73
PRKNO60260 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AC111193.1-201ENST00000504097 155 ntBASIC4.24□□□□□ -1.73
PRKNO60260 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AC119751.5-201ENST00000514077 770 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 OR8A2P-201ENST00000528631 952 ntBASIC4.24□□□□□ -1.73
PRKNO60260 HIGD1AP5-201ENST00000529959 259 ntBASIC4.24□□□□□ -1.73
PRKNO60260 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PRKNO60260 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.24□□□□□ -1.73
PRKNO60260 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.24□□□□□ -1.73
PRKNO60260 MTND4P33-201ENST00000556706 766 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKNO60260 SULT1C2P2-201ENST00000562517 294 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AP005119.2-201ENST00000579735 1105 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC069061.3-201ENST00000582254 823 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKNO60260 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKNO60260 AC008782.1-201ENST00000603386 430 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AL035411.2-201ENST00000604022 421 ntBASIC4.24□□□□□ -1.73
PRKNO60260 IMMP1LP1-201ENST00000605170 488 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC097065.2-201ENST00000608159 533 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC020634.1-201ENST00000608701 549 ntBASIC4.24□□□□□ -1.73
PRKNO60260 AC231759.1-201ENST00000616455 597 ntBASIC4.24□□□□□ -1.73
PRKNO60260 MIR7641-1-201ENST00000627518 61 ntBASIC4.24□□□□□ -1.73
PRKNO60260 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKNO60260 BX649567.1-201ENST00000642071 1134 ntBASIC4.24□□□□□ -1.73
PRKNO60260 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKNO60260 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 AC111188.2-201ENST00000529697 1387 ntBASIC4.24□□□□□ -1.73
PRKNO60260 BTBD10P1-201ENST00000549824 1352 ntBASIC4.24□□□□□ -1.73
PRKNO60260 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
PRKNO60260 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.24□□□□□ -1.73
PRKNO60260 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKNO60260 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKNO60260 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 AC139713.2-214ENST00000642059 1811 ntBASIC4.23□□□□□ -1.73
PRKNO60260 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKNO60260 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKNO60260 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 MIR141-201ENST00000384975 95 ntBASIC4.23□□□□□ -1.73
PRKNO60260 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKNO60260 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKNO60260 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKNO60260 VDAC2P1-201ENST00000399358 958 ntBASIC4.23□□□□□ -1.73
PRKNO60260 MTND4P13-201ENST00000402078 1023 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AL136310.1-201ENST00000404926 654 ntBASIC4.23□□□□□ -1.73
PRKNO60260 RPS24P7-201ENST00000416921 246 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 AL513175.2-201ENST00000422071 443 ntBASIC4.23□□□□□ -1.73
PRKNO60260 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AP001324.1-201ENST00000428553 399 ntBASIC4.23□□□□□ -1.73
PRKNO60260 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 HMGB3P6-201ENST00000444896 598 ntBASIC4.23□□□□□ -1.73
PRKNO60260 CASP3P1-201ENST00000446037 609 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC068135.1-201ENST00000446164 246 ntBASIC4.23□□□□□ -1.73
PRKNO60260 RPS6P2-201ENST00000454208 705 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AL133244.1-201ENST00000456007 258 ntBASIC4.23□□□□□ -1.73
PRKNO60260 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms