Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 AC116667.1-201ENST00000604855 2072 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 PRO1804-201ENST00000623780 2050 ntBASIC3.07□□□□□ -1.92
HLA-DRB4X5D2U9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 PGBD4P8-201ENST00000412993 562 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC087650.1-201ENST00000431445 468 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MTCO3P20-201ENST00000454926 688 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 SNRPGP5-201ENST00000456003 220 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 RPL38P1-201ENST00000460914 211 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 RN7SL604P-201ENST00000492589 296 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 RPS27AP13-201ENST00000498403 237 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC021146.1-201ENST00000511202 716 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MTND2P13-201ENST00000577438 1039 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC023575.1-201ENST00000580510 358 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC006116.5-201ENST00000591936 559 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AC104662.1-201ENST00000604448 511 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL451044.1-201ENST00000604867 238 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL023583.1-201ENST00000607518 1143 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 AL136964.1-201ENST00000622038 2990 ntBASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DRB4X5D2U9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 CCT8P1-201ENST00000413611 1657 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 SNORA56-201ENST00000383966 129 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 HMGN2P8-201ENST00000391458 268 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 SNORA11B-201ENST00000408175 129 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 VN1R31P-201ENST00000417498 730 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC092013.1-201ENST00000438795 332 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC006011.1-201ENST00000442758 349 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC105137.1-201ENST00000484355 562 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 RNU7-143P-201ENST00000516781 65 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC138701.1-201ENST00000524329 714 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AP003730.1-201ENST00000524605 285 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC069366.1-201ENST00000583159 838 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 MIR5684-201ENST00000585074 65 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AF230666.2-201ENST00000602328 725 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 BMS1P7-201ENST00000602440 1052 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 MRPS35P3-201ENST00000603189 709 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC083899.3-201ENST00000603413 594 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 ARF4P1-201ENST00000605447 541 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AL356274.1-201ENST00000617064 410 ntBASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DRB4X5D2U9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DRB4X5D2U9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms