Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NANOGP3-201ENST00000605855 286 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL121612.2-201ENST00000612261 482 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 HULC.1-201ENST00000612720 240 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL122125.1-201ENST00000616999 600 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL031667.3-201ENST00000620124 655 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 PCMTD1P7-201ENST00000634506 357 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL078621.3-201ENST00000623707 2042 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL079343.1-201ENST00000572358 1771 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 CR381670.1-201ENST00000624291 1693 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 THAP12P5-201ENST00000405864 2275 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC005294.1-201ENST00000355509 281 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-500P-201ENST00000362349 107 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RNA5SP507-201ENST00000363603 121 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 Y_RNA.318-201ENST00000365131 97 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 MIR130A-201ENST00000385274 89 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 ATP5F1P4-201ENST00000397288 746 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-920P-201ENST00000410926 92 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 VN1R21P-201ENST00000426703 765 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS26P47-201ENST00000427219 348 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 VDAC1P6-201ENST00000430062 855 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL26P28-201ENST00000451325 435 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 MTCO3P16-201ENST00000454456 754 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL18AP17-201ENST00000455326 198 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC112206.1-201ENST00000468416 477 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AP000893.1-201ENST00000474462 794 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093270.2-201ENST00000486157 792 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS23P1-201ENST00000491662 432 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 OR2A20P-203ENST00000498397 1268 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PGAM1P13-201ENST00000507497 754 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RNA5SP230-201ENST00000517039 122 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC239860.2-201ENST00000525886 270 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 HMGN2P6-201ENST00000551091 273 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AP005136.1-201ENST00000579765 429 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-88P-201ENST00000606801 100 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 AC099063.3-201ENST00000642066 185 ntBASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA3Q9Y5H0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.34□□□□□ -1.56
PCDHGA3Q9Y5H0 NEAT1-202ENST00000501122 22743 ntBASIC5.34□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHGA3Q9Y5H0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 SAMMSON-213ENST00000641336 1521 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL137141.1-201ENST00000624622 4836 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms