Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MKKS-204ENST00000639674 192 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MTND4P34-201ENST00000572715 1371 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC107982.1-201ENST00000507171 1300 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR9G4-201ENST00000302957 984 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 SNORA5.1-201ENST00000384275 131 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 Y_RNA.560-201ENST00000384689 102 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL355379.1-201ENST00000405542 640 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC002524.1-201ENST00000411687 547 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC093162.1-201ENST00000419682 124 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 VTI1BP4-201ENST00000427516 527 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL591363.1-201ENST00000450091 483 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 GAPDHP14-201ENST00000450472 937 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC109462.1-201ENST00000491087 368 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 SNRPCP2-201ENST00000504370 475 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 MTND4P2-201ENST00000507767 1203 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 OR5AK1P-201ENST00000524837 922 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AP001922.4-201ENST00000526967 290 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AL121766.1-201ENST00000547436 487 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AF131215.7-201ENST00000602443 707 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 AC109446.4-201ENST00000623235 2755 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CR381670.1-201ENST00000624291 1693 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CDR1-202ENST00000625883 1485 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC008549.2-201ENST00000333482 706 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 Y_RNA.51-201ENST00000362725 102 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 Y_RNA.408-201ENST00000383987 102 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 MTND1P20-201ENST00000430341 950 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 USP9YP14-201ENST00000430663 563 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC008072.1-201ENST00000434254 824 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC006466.1-201ENST00000438721 289 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC108463.1-201ENST00000450258 347 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 MTND1P27-201ENST00000451117 902 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 DDX39BP2-208ENST00000453923 258 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms