Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MTND4P31-201ENST00000425607 1343 ntBASIC4.95□□□□□ -1.62
VPS4AQ9UN37 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS4AQ9UN37 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4AQ9UN37 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4AQ9UN37 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 Z95327.2-201ENST00000414579 1873 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC120338.1-201ENST00000625074 1541 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 RNU6-619P-201ENST00000365146 108 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 RNU1-74P-201ENST00000384108 171 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SNORA51.8-201ENST00000384234 132 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 MIR16-1-201ENST00000385271 89 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 MIR1303-201ENST00000408625 86 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SNORA11-201ENST00000408789 128 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 RNU4-72P-201ENST00000410754 173 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 C4BPAP2-201ENST00000428434 478 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL390023.1-201ENST00000428836 262 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 USP9YP9-201ENST00000429406 715 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC079776.3-201ENST00000450665 370 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ANKRD26P4-201ENST00000455755 950 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC093755.1-201ENST00000512950 1023 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 NDUFB4P12-201ENST00000513465 390 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 RNU6-941P-201ENST00000516346 108 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC087373.1-201ENST00000524920 491 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AP003461.1-201ENST00000528866 78 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC063949.1-201ENST00000552900 865 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC110760.3-201ENST00000598794 467 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC010620.1-201ENST00000601088 1102 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL109653.1-201ENST00000603091 248 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC008814.1-201ENST00000603797 406 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AL133507.1-201ENST00000605269 557 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AP000676.3-201ENST00000623299 569 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC091905.4-201ENST00000623432 202 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC004943.3-201ENST00000624116 600 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AP000648.2-201ENST00000624182 404 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC007490.1-201ENST00000624321 703 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AC007671.2-201ENST00000637344 619 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SCARNA15-201ENST00000607520 4325 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
VPS4AQ9UN37 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.94□□□□□ -1.62
VPS4AQ9UN37 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC025263.3-201ENST00000622965 1396 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 Y_RNA.192-201ENST00000363977 102 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 Y_RNA.465-201ENST00000384293 102 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 SNORD116-1-201ENST00000384335 95 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AL390316.1-201ENST00000406279 553 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 RN7SKP16-201ENST00000410180 299 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC007435.1-201ENST00000421086 415 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 RPS24P8-201ENST00000431490 402 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 VN1R108P-201ENST00000431580 830 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms