Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL118496.1-201ENST00000440201 1812 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 Z98755.1-201ENST00000407015 1384 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL161909.1-201ENST00000397390 712 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 NPM1P40-201ENST00000412758 733 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 LUZP4P1-201ENST00000415420 344 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC234782.4-201ENST00000417646 1048 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 GNG5P5-201ENST00000420444 220 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL593851.1-201ENST00000426171 157 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 HMGN2P27-201ENST00000427352 270 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RPL7AP49-201ENST00000429522 581 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 BX323845.1-201ENST00000432417 179 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL591438.1-201ENST00000433508 581 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC138761.5-201ENST00000433967 325 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC093155.1-201ENST00000440164 826 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 TXNP5-201ENST00000441043 315 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 FHP1-201ENST00000442741 703 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC104306.1-201ENST00000449702 371 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 GAPDHP14-201ENST00000450472 937 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL354710.1-201ENST00000453641 246 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 RNU7-125P-201ENST00000458760 62 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC063943.1-201ENST00000465434 453 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RN7SL197P-201ENST00000466981 299 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 SYPL1P1-201ENST00000473622 768 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RPL30P6-201ENST00000475925 342 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 RPS27P23-201ENST00000487608 251 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC116553.2-201ENST00000564203 463 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 MIR3667-201ENST00000581025 74 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RN7SL52P-201ENST00000584271 284 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC245008.1-201ENST00000608123 476 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RN7SL722P-201ENST00000617780 284 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 RN7SL565P-201ENST00000618246 284 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 MIR6839-201ENST00000620425 113 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 ELL2P3-201ENST00000457883 1602 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL022311.1-201ENST00000623726 19416 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AL353743.4-201ENST00000422653 1547 ntBASIC5.72□□□□□ -1.49
VTA1Q9NP79 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VTA1Q9NP79 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTA1Q9NP79 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VTA1Q9NP79 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VTA1Q9NP79 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VTA1Q9NP79 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VTA1Q9NP79 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTA1Q9NP79 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms