Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092638.1-201ENST00000411966 1275 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC105402.1-201ENST00000413336 545 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 RAD23BP1-201ENST00000421404 1227 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC246680.2-201ENST00000422106 389 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CDY14P-201ENST00000431260 1014 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 MTND2P5-201ENST00000432656 1006 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CDY12P-201ENST00000440679 1015 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CDY13P-201ENST00000445813 1015 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CDY23P-201ENST00000451661 1014 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CCDC75P1-201ENST00000469247 791 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 MTND4LP2-201ENST00000502312 285 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 OR5AK3P-201ENST00000527486 1297 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 RN7SL690P-201ENST00000582087 240 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 VN1R87P-201ENST00000596706 487 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 BPIFA4P-203ENST00000603168 689 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC093424.1-201ENST00000604999 338 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 MIR6780A-201ENST00000615089 68 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC006386.1-201ENST00000619436 415 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 AC006963.1-201ENST00000624003 1052 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 Z95327.2-201ENST00000414579 1873 ntBASIC4.66□□□□□ -1.66
PCDH9Q9HC56 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH9Q9HC56 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.66
PCDH9Q9HC56 ZNF849P-201ENST00000594711 1566 ntBASIC4.65□□□□□ -1.66
PCDH9Q9HC56 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 AC073429.2-201ENST00000569694 1444 ntBASIC4.65□□□□□ -1.66
PCDH9Q9HC56 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH9Q9HC56 OR52B1P-201ENST00000316506 909 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RNU1-108P-201ENST00000362556 161 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RNVU1-6-201ENST00000364688 164 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RNU4-31P-201ENST00000384211 141 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC093719.1-202ENST00000392735 373 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 MCTS2P-201ENST00000394552 546 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL049697.2-201ENST00000403708 294 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RPL7P27-201ENST00000403775 720 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 CENPIP1-201ENST00000425713 902 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC092648.1-201ENST00000425870 423 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 SKP1P3-201ENST00000429280 487 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 OR10R1P-201ENST00000441524 1141 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 HSFY3P-201ENST00000444242 1191 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL358794.1-201ENST00000445689 381 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL035551.1-201ENST00000446931 348 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC092685.1-201ENST00000447960 1243 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC073264.2-201ENST00000448886 166 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL513533.1-201ENST00000453728 415 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC092155.2-201ENST00000454675 477 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 GTF2IP12-201ENST00000456547 356 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC020898.1-201ENST00000474167 787 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 RN7SKP287-201ENST00000516546 266 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 LRRC34P1-201ENST00000542742 915 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC234772.3-201ENST00000602277 528 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC087283.1-201ENST00000604029 1074 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL133338.2-201ENST00000604292 736 ntBASIC4.65□□□□□ -1.67
PCDH9Q9HC56 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AC139713.2-210ENST00000641741 992 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms