Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.89□□□□□ -1.47
BCAS3Q9H6U6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 Y_RNA.18-201ENST00000362461 102 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 RNY4P24-201ENST00000362735 96 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 Y_RNA.311-201ENST00000365068 96 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 GJA6P-201ENST00000415117 1042 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC092017.2-201ENST00000427600 362 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AP001324.1-201ENST00000428553 399 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 RPL34P20-201ENST00000442771 351 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 HMGB1P16-201ENST00000447155 540 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 CALM1P2-201ENST00000452941 448 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC072039.1-201ENST00000477611 581 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 IGBP1P5-201ENST00000507524 1000 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC074344.1-201ENST00000512823 224 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 EIF3KP3-201ENST00000514461 639 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC025881.1-201ENST00000518851 512 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 NPM1P6-201ENST00000521088 871 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC092490.3-201ENST00000545370 572 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC074029.1-201ENST00000552531 1044 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL121579.1-201ENST00000555129 305 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC009063.1-201ENST00000563342 702 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC008814.1-201ENST00000603797 406 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL022154.1-201ENST00000604698 785 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC087783.2-201ENST00000605070 562 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC093799.2-201ENST00000610062 578 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 BX284613.1-201ENST00000452221 1641 ntBASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
BCAS3Q9H6U6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 BTF3P7-201ENST00000407097 488 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC013404.1-201ENST00000413068 249 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 CCDC58P2-201ENST00000417131 366 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC000111.3-201ENST00000433478 193 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC005002.1-201ENST00000447458 540 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC090804.1-201ENST00000448870 490 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 SEPT7P3-201ENST00000455017 621 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC002075.1-201ENST00000457396 676 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 OR9M1P-201ENST00000459641 921 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 KRT19P6-201ENST00000510983 209 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 OR51A1P-201ENST00000511110 946 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 RNU6-506P-201ENST00000516553 94 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC011840.5-201ENST00000582125 771 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms