Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AP005901.4-201ENST00000577336 569 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC006116.5-201ENST00000591936 559 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AC026368.1-201ENST00000614934 690 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AP002967.1-201ENST00000624203 539 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPF3BQ9BZI7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 RN7SKP33-201ENST00000410942 340 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 HSPE1P12-201ENST00000412576 301 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AL162388.1-201ENST00000450912 352 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AL121877.1-201ENST00000453704 622 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 RPL7P1-201ENST00000468161 747 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 RPL7P9-201ENST00000468715 747 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC090281.1-201ENST00000523019 276 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 MIR8059-201ENST00000620427 81 ntBASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
UPF3BQ9BZI7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 OR11H4-201ENST00000315409 1082 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 CYCSP19-201ENST00000411715 316 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 YY1P1-201ENST00000427625 668 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 RRM2P4-201ENST00000441721 562 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 VWA8P1-201ENST00000510889 176 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 HMGB3P26-201ENST00000560051 582 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AC017100.2-201ENST00000584628 355 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AC244100.1-202ENST00000621554 382 ntBASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
UPF3BQ9BZI7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 RNA5SP283-201ENST00000365604 119 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 MIR449B-201ENST00000384995 97 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 OR5BE1P-201ENST00000425977 939 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AL356276.2-201ENST00000435919 558 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 TBCAP1-201ENST00000436520 327 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 RPS11P1-201ENST00000451072 473 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 PRSS3P4-201ENST00000453323 162 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 RPL38P1-201ENST00000460914 211 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AC110743.1-201ENST00000584870 478 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 MIR6868-201ENST00000611215 58 ntBASIC4.76□□□□□ -1.65
UPF3BQ9BZI7 MIR4727-201ENST00000622232 55 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms