Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC139712.2-201ENST00000424302 339 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 TPT1P12-201ENST00000448968 492 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC104308.1-201ENST00000454621 333 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 MEMO1P3-201ENST00000459811 302 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 RNU6-1308P-201ENST00000516817 103 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 RNA5SP135-201ENST00000517019 125 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.721-201ENST00000517207 102 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AP002373.2-201ENST00000541631 1060 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AL020997.2-201ENST00000602607 184 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 API5P2-201ENST00000397055 1498 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AP004289.2-201ENST00000444413 1457 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC104581.5-201ENST00000624171 7141 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC114546.3-201ENST00000623582 1734 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 CDC27P3-201ENST00000635418 1910 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RNU6-874P-201ENST00000362390 105 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.80-201ENST00000362996 102 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL672167.2-201ENST00000377164 879 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RNU4-31P-201ENST00000384211 141 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 MIR514A2-201ENST00000385131 88 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 MIR514A3-201ENST00000385132 88 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 MIR765-201ENST00000390226 114 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RPL37P10-201ENST00000412884 288 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL450992.3-201ENST00000413192 568 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC074085.1-201ENST00000413598 418 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL590609.2-201ENST00000421430 368 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL121916.1-201ENST00000429405 308 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC012075.1-201ENST00000436549 580 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RNU6-864P-201ENST00000516256 108 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 RAB9BP1-201ENST00000519581 626 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC023157.2-201ENST00000540596 141 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC099489.2-201ENST00000574976 260 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AC073869.10-201ENST00000642016 354 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms