Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 AC083899.2-201ENST00000423285 1376 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC027290.2-201ENST00000623210 18662 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 DDX18P5-201ENST00000534547 1306 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 AC103591.2-201ENST00000265259 766 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 RN7SKP149-201ENST00000363008 344 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 MIR585-201ENST00000384887 94 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 MIR525-201ENST00000384978 85 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 RNA5SP372-201ENST00000390836 115 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AL355615.1-201ENST00000406187 641 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 RBMY2KP-201ENST00000418221 992 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC013429.2-201ENST00000418798 781 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 OR2AM1P-201ENST00000422137 422 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC241520.1-201ENST00000422654 1099 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 OR5AW1P-201ENST00000426334 1006 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC012497.1-201ENST00000429392 575 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 USP9YP7-201ENST00000436723 430 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 TCEA1P1-201ENST00000449716 880 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 USP9YP32-201ENST00000452432 430 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 DNAJC19P8-201ENST00000452887 259 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 RPS3AP53-201ENST00000454716 778 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 RPS4XP6-201ENST00000477670 797 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 AC098799.3-201ENST00000506095 438 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 OR51K1P-201ENST00000510214 950 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC112198.4-201ENST00000515450 351 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC010476.1-201ENST00000519111 851 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 NDUFB4P11-201ENST00000560510 395 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC124068.1-201ENST00000563131 678 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 MIR4789-201ENST00000577469 82 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 IMMP1LP1-201ENST00000605170 488 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 AC121761.2-201ENST00000617300 689 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
SSX3Q99909 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SSX3Q99909 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX3Q99909 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
SSX3Q99909 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SSX3Q99909 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX3Q99909 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 A2MP1-204ENST00000566278 4130 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AL356489.2-201ENST00000566968 3528 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 ZNF849P-201ENST00000594711 1566 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC016716.1-201ENST00000265882 708 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 SNORA70.10-201ENST00000384515 134 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 AC136624.1-201ENST00000400791 413 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 SNORA77-201ENST00000408716 125 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 AF186996.5-201ENST00000418098 904 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 OR4F13P-201ENST00000428478 931 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms