Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIR1271-201ENST00000408537 86 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 RPL21P110-201ENST00000433345 446 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC084759.1-201ENST00000561168 290 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC006116.10-201ENST00000591836 581 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 MIR1261-201ENST00000408659 82 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC017079.2-201ENST00000416102 485 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC093698.1-201ENST00000423843 571 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 NANOGNBP1-201ENST00000448444 480 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AL591473.1-201ENST00000464297 313 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 SNORA70.17-201ENST00000516449 133 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC015871.5-202ENST00000623252 701 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 RBMY1KP-201ENST00000423480 476 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC010503.3-201ENST00000594355 540 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC093732.2-201ENST00000607950 274 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC005344.1-201ENST00000613391 459 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC026368.1-201ENST00000614934 690 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 RPL7P24-201ENST00000493052 752 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC138938.1-201ENST00000515431 782 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 AC002069.2-201ENST00000603580 883 ntBASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSMD1Q96PZ7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RNU6-304P-201ENST00000364855 107 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC010095.1-201ENST00000443543 144 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 SETD6P1-201ENST00000444575 317 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 SNRPCP3-201ENST00000474888 476 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 PTGES3P3-201ENST00000511479 482 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC084036.1-201ENST00000609190 508 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC097505.1-201ENST00000610199 565 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RN7SKP222-201ENST00000410651 315 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RN7SKP97-201ENST00000410966 333 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL451044.1-201ENST00000604867 238 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL590240.3-201ENST00000621416 943 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AF117829.1-206ENST00000621883 3802 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AL161912.2-201ENST00000565707 3007 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 FAM172BP-201ENST00000487497 1089 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RAC1P2-201ENST00000511164 579 ntBASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 AC012417.1-201ENST00000582307 1039 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms