Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC005832.3-201ENST00000537929 631 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AL121766.1-201ENST00000547436 487 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC004825.1-201ENST00000555068 586 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 MIR4675-201ENST00000577898 77 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC018714.1-201ENST00000605028 208 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AL021997.1-201ENST00000605757 193 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AP000254.1-201ENST00000609934 520 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC4Q92889 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AL049767.1-202ENST00000637826 242 ntBASIC5.83□□□□□ -1.48
ERCC4Q92889 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ERCC4Q92889 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC4Q92889 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC4Q92889 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC4Q92889 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC097461.1-201ENST00000568928 2821 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ERCC4Q92889 RN7SKP124-201ENST00000364730 341 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 MIR320B1-201ENST00000390209 79 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 SNORD65.1-201ENST00000390889 71 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AL513325.1-201ENST00000417716 1034 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AL049610.1-201ENST00000423374 372 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 EI24P4-201ENST00000423683 1078 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC012519.1-201ENST00000424588 610 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AL121776.1-201ENST00000429337 372 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 CYCSP6-201ENST00000434498 302 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 RPS24P1-201ENST00000438550 371 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC4Q92889 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC100832.1-201ENST00000471945 383 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 RN7SL547P-201ENST00000490793 290 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC109445.1-201ENST00000512356 383 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC006427.1-201ENST00000514359 712 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 HMGB1P40-201ENST00000525121 540 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC4Q92889 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 SNORD95-201ENST00000579879 68 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 ZNF415P1-201ENST00000582279 1166 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC4Q92889 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC4Q92889 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC078795.2-201ENST00000602835 1252 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 WISP1-OT1-201ENST00000602893 642 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 SUGT1P3-202ENST00000604259 383 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC104695.2-201ENST00000605056 775 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AC092354.2-201ENST00000607786 514 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 AL359740.1-201ENST00000624340 592 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AF001550.2-201ENST00000636643 217 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC000123.3-201ENST00000624029 4975 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 ZNF833P-201ENST00000424938 1494 ntBASIC5.82□□□□□ -1.48
ERCC4Q92889 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC4Q92889 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ERCC4Q92889 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC4Q92889 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
ERCC4Q92889 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC4Q92889 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC4Q92889 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 RNU6-621P-201ENST00000364752 109 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 RNA5SP90-201ENST00000364801 99 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC4Q92889 Y_RNA.560-201ENST00000384689 102 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AL390316.1-201ENST00000406279 553 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 SNORA11C-201ENST00000408532 129 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms