Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 SNORD35B-201ENST00000363660 87 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 SNORD96B-201ENST00000386148 79 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 RNA5SP39-201ENST00000411245 120 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 HIGD1AP18-201ENST00000520730 278 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC012417.1-201ENST00000582307 1039 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 MIR8069-1-201ENST00000616627 86 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 MIR8069-2-201ENST00000621412 86 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC118273.1-201ENST00000525324 3006 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 MIR1251-201ENST00000408552 70 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 SEPT7P3-201ENST00000455017 621 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC012158.1-204ENST00000483430 465 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 MIR6852-201ENST00000621699 66 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 APOOP2-201ENST00000461561 539 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 RPL23AP12-201ENST00000467573 473 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC017015.1-201ENST00000477387 286 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC084198.1-201ENST00000477747 402 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC025518.1-201ENST00000479856 347 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AC063950.1-201ENST00000552036 308 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 SNX6P1-201ENST00000601728 1224 ntBASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALMS1Q8TCU4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AP004289.2-201ENST00000444413 1457 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC017079.2-201ENST00000416102 485 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL136126.1-201ENST00000473603 402 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 RPL21P7-201ENST00000557463 483 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 COX6CP4-201ENST00000605798 228 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 UBTFL3-201ENST00000418934 1024 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 UBTFL6-201ENST00000477929 1024 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 OR10D4P-201ENST00000525892 951 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 MIR4513-201ENST00000581077 86 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC243654.2-201ENST00000612843 443 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 MTND4LP20-201ENST00000402379 270 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL512649.1-201ENST00000428997 581 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AL589765.3-201ENST00000446084 462 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 HMGB1P19-201ENST00000517578 577 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AC026368.1-201ENST00000614934 690 ntBASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
ALMS1Q8TCU4 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 RPL7P24-201ENST00000493052 752 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms