Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AP001880.2-201ENST00000538233 448 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC044860.2-201ENST00000561005 179 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 BGLT3-201ENST00000564523 994 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC004987.4-201ENST00000603383 338 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC080078.2-201ENST00000603766 501 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 DPRXP5-201ENST00000604662 539 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC105129.3-201ENST00000605455 485 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 MIR7155-201ENST00000615925 56 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL121890.3-201ENST00000618494 516 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ZFRP1-201ENST00000457579 2970 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 AL049737.1-201ENST00000413920 1403 ntBASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZNF549Q6P9A3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RNU6-192P-201ENST00000391253 100 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 FABP12P1-201ENST00000401911 322 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RNA5SP113-201ENST00000410486 84 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RPL26P37-201ENST00000411983 438 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 BTF3P9-201ENST00000418784 283 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RPS3AP44-201ENST00000425466 790 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 DLGAP5P1-201ENST00000430307 464 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AL353898.1-201ENST00000444055 238 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RBMY2TP-201ENST00000451162 947 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC239798.3-201ENST00000454459 408 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC063943.1-201ENST00000465434 453 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RPL23AP44-201ENST00000482216 473 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 RN7SL591P-201ENST00000496150 292 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 HPRT1P2-201ENST00000505250 544 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AF213884.2-201ENST00000510417 903 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 MTCO1P49-201ENST00000523429 802 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 PDCL2P2-201ENST00000533651 189 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC027807.1-201ENST00000559921 996 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AL390726.5-202ENST00000564800 256 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AP005262.1-201ENST00000582646 997 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC068790.6-201ENST00000602558 258 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 SUMO2P14-201ENST00000604488 293 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC124312.4-201ENST00000605533 310 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 COX6CP4-201ENST00000605798 228 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC090510.2-201ENST00000617465 629 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC007490.1-201ENST00000624321 703 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC098679.5-201ENST00000624394 571 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC092184.1-201ENST00000625042 715 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 ZNF542P-204ENST00000482727 1305 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZNF549Q6P9A3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZNF549Q6P9A3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms